RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 SYNPOQ8N3V7 929 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 ZNF540Q8NDQ6 660 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 VPS37AQ8NEZ2 397 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 SPPL2AQ8TCT8 520 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 ZNF480Q8WV37 535 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 CHTF18Q8WVB6 975 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 FAR1Q8WVX9 515 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 C11orf24Q96F05 449 aaPredicted RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 MAGEB10Q96LZ2 347 aaPredicted RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 FOPNLQ96NB1 174 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 TMEM121BQ9BXQ6 578 aaPredicted RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 OR51B5Q9H339 312 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 GULP1Q9UBP9 304 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 KCNE2Q9Y6J6 123 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 CXorf51AA0A1B0GTR3 108 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 SUV39H1O43463 412 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 SEMG1P04279 462 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 CCDC159P0C7I6 412 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 CD6P30203 668 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 RPP38P78345 283 aaKnown RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 LRRC26Q2I0M4 334 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 ARHGAP15Q53QZ3 475 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 ZNF385BQ569K4 471 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 ERICH5Q6P6B1 374 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 SLCO4C1Q6ZQN7 724 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 PARS2Q7L3T8 475 aaKnown RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 GRASPQ7Z6J2 395 aaPredicted RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 TRAPPC5Q8IUR0 188 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 OR56A3Q8NH54 315 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 OR52J3Q8NH60 311 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 CIDECQ96AQ7 238 aaPredicted RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 LRRC3BQ96PB8 259 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 OR2AG1Q9H205 316 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 EXO1Q9UQ84 846 aaKnown RBP10.79□□□□□ -0.68
TP53-223ENST00000618944 PRKAB1Q9Y478 270 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 PCDHGA10Q9Y5H3 936 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 OBSL1O75147 1896 aa10.79□□□□□ -0.68
TP53-223ENST00000618944 CLPXO76031 633 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 C1orf105O95561 183 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 FADS2O95864 444 aaKnown RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 TIMP1P01033 207 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 HLA-EP13747 358 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ETFAP13804 333 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 NPPBP16860 134 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ITIH1P19827 911 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 RRM2P31350 389 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 OR1E2P47887 323 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 PRLHRP49683 370 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 KCNJ10P78508 379 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ITGADQ13349 1161 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 IL18R1Q13478 541 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 DMC1Q14565 340 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 TCEAL5Q5H9L2 206 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 GPR153Q6NV75 609 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ERAP2Q6P179 960 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 MED27Q6P2C8 311 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 Q6ZNX1 250 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 DPPA4Q7L190 304 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 CCDC71Q8IV32 467 aaPredicted RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 NPAS3Q8IXF0 933 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 SETD9Q8NE22 299 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 VN1R2Q8NFZ6 395 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 WDR48Q8TAF3 677 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ZFP90Q8TF47 636 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 FBLIM1Q8WUP2 373 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 RORBQ92753 470 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 GLMNQ92990 594 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 C7orf34Q96L11 122 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 TMEM184CQ9NVA4 438 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ACSL6Q9UKU0 697 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 TPRKBQ9Y3C4 175 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 TESMINQ9Y4I5 508 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ZNF106Q9H2Y7 1883 aaKnown RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 CHD7Q9P2D1 2997 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 C1orf226A1L170 272 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ZSCAN9O15535 394 aaPredicted RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 FAM20BO75063 409 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 JRKO75564 520 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 GCM2O75603 506 aaPredicted RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 C6orf47O95873 294 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 VIPP01282 170 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 HNRNPCP07910 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
TP53-223ENST00000618944 PSMB9P28065 219 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 HPCAL1P37235 193 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 MMP12P39900 470 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 TBPL1P62380 186 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 HBA1P69905 142 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ATP1A4Q13733 1029 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 SLBPQ14493 270 aaKnown RBP eCLIP10.78□□□□□ -0.68
TP53-223ENST00000618944 NR1D2Q14995 579 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 ZNF77Q15935 545 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 CTF1Q16619 201 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 CAPN13Q6MZZ7 669 aaPredicted RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 GPR155Q7Z3F1 870 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 TRMT11Q7Z4G4 463 aaKnown RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 C12orf40Q86WS4 652 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 PGBD3Q8N328 593 aa10.78□□□□□ -0.68
TP53-223ENST00000618944 MRPL43Q8N983 215 aaKnown RBP10.78□□□□□ -0.68
TP53-223ENST00000618944 SMYD1Q8NB12 490 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms