RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TAPBPO15533 448 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 KLK10O43240 276 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 TLX3O43711 291 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 AHCYL1O43865 530 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 PRAMEF4O60810 478 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SLC16A8O95907 504 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FESP07332 822 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SBK3P0C264 359 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 PIM1P11309 404 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FGF3P11487 239 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ENO3P13929 434 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 CD1DP15813 335 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ST6GAL1P15907 406 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 UGT2B7P16662 529 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ITIH1P19827 911 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 HRH2P25021 359 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 IMPA1P29218 277 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 CRABP2P29373 138 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SERPINB3P29508 390 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 PRDX3P30048 256 aaKnown RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 GABRA4P48169 554 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 HSPA13P48723 471 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ARL4DP49703 201 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SEPHS1P49903 392 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 RAB28P51157 221 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 IL2P60568 153 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 RAB10P61026 200 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SH3BP2P78314 561 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 POU4F1Q01851 419 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 TAP2Q03519 686 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 CLN3Q13286 438 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 DYNC1I2Q13409 638 aaKnown RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 KCNAB1Q14722 419 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 PLCL1Q15111 1095 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SPATS1Q496A3 300 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 MANEAQ5SRI9 462 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 PRAMEF9Q5VWM5 478 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FAM219BQ5XKK7 198 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SUSD1Q6UWL2 747 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 UBE2R2Q712K3 238 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 AMIGO1Q86WK6 493 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 TMEM151AQ8N4L1 468 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 KIF2BQ8N4N8 673 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FBXO15Q8NCQ5 510 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 OR9A1PQ8NGU1 263 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 OR2L8Q8NGY9 312 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 HMGCLL1Q8TB92 370 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF480Q8WV37 535 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 KCTD4Q8WVF5 259 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SKA2Q8WVK7 121 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 THAP4Q8WY91 577 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 RAD51AP1Q96B01 352 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 NXNL1Q96CM4 212 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SPDL1Q96EA4 605 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC126Q96EE4 140 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 TCTN2Q96GX1 697 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 VPS50Q96JG6 964 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SLC45A3Q96JT2 553 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FAR2Q96K12 515 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 RILPQ96NA2 401 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 TSNARE1Q96NA8 513 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 BTBD9Q96Q07 612 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF184Q99676 751 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SH3GL3Q99963 347 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC106Q9BWC9 280 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SPRY4Q9C004 299 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 DERL2Q9GZP9 239 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SRMSQ9H3Y6 488 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 APMAPQ9HDC9 416 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FAM60AQ9NP50 221 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ACTR10Q9NZ32 417 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 C6orf203Q9P0P8 240 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 STOX2Q9P2F5 926 aaPredicted RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 DCTN4Q9UJW0 460 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SERTAD3Q9UJW9 196 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 PADI1Q9ULC6 663 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ASB1Q9Y576 335 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 MDC1Q14676 2089 aaKnown RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SPENQ96T58 3664 aaKnown RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 IGKV1-8A0A0C4DH67 115 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC189A1A4V9 331 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 GSAPA4D1B5 854 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 LRRC14BA6NHZ5 514 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF891A8MT65 544 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 C9orf172C9J069 976 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TXNDC9O14530 226 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SLC16A5O15375 505 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CCNT2O60583 730 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SRPX2O60687 465 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TRIM13O60858 407 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TIAF1O95411 115 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CBX6O95503 412 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CATP04040 527 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 KLK3P07288 261 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 C8GP07360 202 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 RAB40ALP0C0E4 278 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC166P0CW27 439 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 MTHFD2P13995 350 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CPA3P15088 417 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms