RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ZNF711Q9Y462 761 aa6.33□□□□□ -1.4
SCAMP1-206ENST00000618166 SPO11Q9Y5K1 396 aa6.33□□□□□ -1.4
SCAMP1-206ENST00000618166 NFS1Q9Y697 457 aa6.33□□□□□ -1.4
SCAMP1-206ENST00000618166 SNRNP200O75643 2136 aaKnown RBP6.33□□□□□ -1.4
SCAMP1-206ENST00000618166 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM234BA2RU67 622 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 DDX3XO00571 662 aaKnown RBP eCLIP6.32□□□□□ -1.49e-11■■■■■ 54
SCAMP1-206ENST00000618166 KIAA0513O60268 411 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 GLSO94925 669 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 MMP2P08253 660 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 GABRA1P14867 456 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 GPD1P21695 349 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 DPP4P27487 766 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 TRHRP34981 398 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 SLC26A3P40879 764 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 ADARP55265 1226 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 MLF1P58340 268 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 NOMO3P69849 1222 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 FOXO1Q12778 655 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 FOXF2Q12947 444 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 SIX1Q15475 284 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 TYSND1Q2T9J0 566 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 CCDC40Q4G0X9 1142 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 ACSF3Q4G176 576 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 AWAT1Q58HT5 328 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 MFSD4BQ5TF39 518 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 CYB5R2Q6BCY4 276 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 PAPD4Q6PIY7 484 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM151BQ6UXP7 276 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 NT5DC3Q86UY8 548 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 CYP4Z2PQ8N1L4 340 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 BBS5Q8N3I7 341 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 TEX26Q8N6G2 289 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 C2CD4AQ8NCU7 369 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 DDHD1Q8NEL9 900 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 SLC30A5Q8TAD4 765 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 METTL21AQ8WXB1 218 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 MMABQ96EY8 250 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 ART5Q96L15 291 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 PEBP4Q96S96 227 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 GPR63Q9BZJ6 419 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 IL26Q9NPH9 171 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 CIDEBQ9UHD4 219 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 WBP11Q9Y2W2 641 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 TDRKHQ9Y2W6 561 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 SCN2AQ99250 2005 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 ARHGAP21Q5T5U3 1957 aa6.32□□□□□ -1.4
SCAMP1-206ENST00000618166 A0A0A6YYC8 382 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 A0A0J9YVX5 310 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM157AC9JC47 383 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 I3L1I5 382 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 OVOL3O00110 214 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MATN3O15232 486 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ITGA10O75578 1167 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MMEP08473 750 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CRYGSP22914 178 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 AKT1P31749 480 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SHMT2P34897 504 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 BUD31P41223 144 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MC3RP41968 323 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CD86P42081 329 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CPA2P48052 419 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 TAS2R50P59544 299 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 RPL26P61254 145 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 RPS4XP62701 263 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 DPYSQ14117 519 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ETFDHQ16134 617 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 EXT1Q16394 746 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MINDY4Q4G0A6 757 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SFT2D3Q587I9 215 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 PPP6R3Q5H9R7 873 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ALG1LQ6GMV1 187 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ENOSF1Q7L5Y1 443 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF550Q7Z398 422 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 POLNQ7Z5Q5 900 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ATPAF2Q8N5M1 289 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 LINC01555Q8NAE3 123 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 OR2M7Q8NG81 312 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ELP5Q8TE02 316 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SARAFQ96BY9 339 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ZC3HAV1LQ96H79 300 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CABS1Q96KC9 395 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SPATA13Q96N96 652 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CCM2Q9BSQ5 444 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 LDAHQ9H6V9 325 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MVB12BQ9H7P6 319 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MKKSQ9NPJ1 570 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CWC15Q9P013 229 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 NDRG3Q9UGV2 375 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 KCNS2Q9ULS6 477 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 RPL26L1Q9UNX3 145 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 DUSP10Q9Y6W6 482 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 LOC100289279A0A1B0GTE1 492 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms