RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 WDR20Q8TBZ3 569 aa13.4□□□□□ -0.27
CACNA1C-231ENST00000616390 ZFYVE19Q96K21 471 aa13.4□□□□□ -0.27
CACNA1C-231ENST00000616390 CSF3RQ99062 836 aa13.4□□□□□ -0.27
CACNA1C-231ENST00000616390 FZD4Q9ULV1 537 aa13.4□□□□□ -0.27
CACNA1C-231ENST00000616390 SAMHD1Q9Y3Z3 626 aaKnown RBP13.4□□□□□ -0.27
CACNA1C-231ENST00000616390 ZNF451Q9Y4E5 1061 aa13.4□□□□□ -0.27
CACNA1C-231ENST00000616390 J3QRK9 145 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 SLC1A7O00341 560 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 SLCO2B1O94956 709 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 PAHP00439 452 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 CATP04040 527 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 FABP3P05413 133 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 GSTM1P09488 218 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ZNF30P17039 623 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 IMPA1P29218 277 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 KDELR2P33947 212 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 TTKP33981 857 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 NFATC3Q12968 1075 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 MRPL28Q13084 256 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 SP140Q13342 867 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 CDKL4Q5MAI5 379 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 CPTPQ5TA50 214 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 LIPJQ5W064 366 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 DGLUCYQ7Z3D6 616 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 HIPK1Q86Z02 1210 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ZZZ3Q8IYH5 903 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 HDAC2Q92769 488 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 GLYATL1Q969I3 302 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 FBXL8Q96CD0 374 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 C19orf43Q9BQ61 176 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 OR2AG1Q9H205 316 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 AXIN1O15169 862 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 EPCAMP16422 314 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 PTPN2P17706 415 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ALDH4A1P30038 563 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 CRATP43155 626 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 MAP2K4P45985 399 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 MC1RQ01726 317 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 SRSF11Q05519 484 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 DGCR6Q14129 220 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 DPY19L1Q2PZI1 675 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ARHGAP15Q53QZ3 475 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 CRTC3Q6UUV7 619 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 RNF165Q6ZSG1 346 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 TRMT11Q7Z4G4 463 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 FAM9CQ8IZT9 166 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 TRAM1L1Q8N609 369 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 OR7G3Q8NG95 312 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ZNF420Q8TAQ5 688 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 MRGPRX3Q96LB0 322 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 FOPNLQ96NB1 174 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 NRTNQ99748 197 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ZSCAN5AQ9BUG6 496 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 ACAT2Q9BWD1 397 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 TMEM121BQ9BXQ6 578 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 MKL2Q9ULH7 1088 aa13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 RUVBL1Q9Y265 456 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-231ENST00000616390 H3BM21 787 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 SCN2BO60939 215 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 CPNE6O95741 557 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 ANGPTL1O95841 491 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 BCL10O95999 233 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 S100A1P23297 94 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 CDK5R2Q13319 367 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 PTOV1Q86YD1 416 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 GALNT13Q8IUC8 556 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 NODALQ96S42 347 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 B3GNT4Q9C0J1 378 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 DOCK9Q9BZ29 2069 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 HELZP42694 1942 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 ANTXRLA6NF34 631 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 SLC16A5O15375 505 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 PSIP1O75475 530 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 HOXB9P17482 250 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 CREMQ03060 361 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 EPS8Q12929 822 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 ZNF805Q5CZA5 627 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 ZNF691Q5VV52 312 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 PARS2Q7L3T8 475 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 CHPFQ8IZ52 775 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 NAGSQ8N159 534 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 DDHD1Q8NEL9 900 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 PJA1Q8NG27 643 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 OR4A15Q8NGL6 344 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 OR52J3Q8NH60 311 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 OR5AK3PQ8NH89 298 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 DNAJB8Q8NHS0 232 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 CCM2Q9BSQ5 444 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 FUNDC2Q9BWH2 189 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
CACNA1C-231ENST00000616390 ERVK-18Q9QC07 812 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms