RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 OR1C1Q15619 314 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 NSDHLQ15738 373 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 C3AR1Q16581 482 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 KRTCAP3Q53RY4 240 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 SFT2D3Q587I9 215 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 TMEM214Q6NUQ4 689 aaKnown RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 ASPGQ86U10 573 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 CRLF3Q8IUI8 442 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 SLC5A8Q8N695 610 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 M1APQ8TC57 530 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 CD200R1Q8TD46 325 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 SLC13A3Q8WWT9 602 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 CCDC138Q96M89 665 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 TSPAN10Q9H1Z9 355 aaPredicted RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 XAB2Q9HCS7 855 aaKnown RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 TRMT6Q9UJA5 497 aaKnown RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 TINAGQ9UJW2 476 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 FBXO5Q9UKT4 447 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 MED16Q9Y2X0 877 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 ZCWPW2A0A1B0GU75 182 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 NPIPA5E9PKD4 350 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 RDH16O75452 317 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 CDC123O75794 336 aaPredicted RBP16.83■□□□□ 0.28
SMN2-213ENST00000614240 MAGEA6P43360 314 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 CSNK1G2P78368 415 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 ABRAXAS2Q15018 415 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 SPINK14Q6IE38 97 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 LRRC8EQ6NSJ5 796 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 UGT3A1Q6NUS8 523 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 H3F3CQ6NXT2 135 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 PAPD4Q6PIY7 484 aaKnown RBP16.83■□□□□ 0.28
SMN2-213ENST00000614240 SLC26A11Q86WA9 606 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 LMNTD2Q8IXW0 634 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 SHISA5Q8N114 240 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 HORMAD2Q8N7B1 307 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 TMEM178AQ8NBL3 297 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 KCT2Q8NC54 265 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 FAM98AQ8NCA5 519 aaKnown RBP16.83■□□□□ 0.28
SMN2-213ENST00000614240 MDS2Q8NDY4 140 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 PEX11GQ96HA9 241 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 SIGLEC12Q96PQ1 595 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 LPAR4Q99677 370 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 RBCK1Q9BYM8 510 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 FAM129AQ9BZQ8 928 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 ATG10Q9H0Y0 220 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 NPIPA1Q9UND3 350 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 NAALAD2Q9Y3Q0 740 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 PCDHGB6Q9Y5F9 930 aa16.83■□□□□ 0.28
SMN2-213ENST00000614240 HEATR5BQ9P2D3 2071 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 PABPN1LA6NDY0 278 aaKnown RBP16.82■□□□□ 0.28
SMN2-213ENST00000614240 GABRR3A8MPY1 467 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 EIF3FO00303 357 aaPredicted RBP16.82■□□□□ 0.28
SMN2-213ENST00000614240 WISP2O76076 250 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 HAUS5O94927 633 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 SLC35G6P0C7Q6 338 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 IL10P22301 178 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 COILP38432 576 aaPredicted RBP16.82■□□□□ 0.28
SMN2-213ENST00000614240 RGS4P49798 205 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 MPP1Q00013 466 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 NAE1Q13564 534 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 CAPN13Q6MZZ7 669 aaPredicted RBP16.82■□□□□ 0.28
SMN2-213ENST00000614240 AGTRAPQ6RW13 159 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 THAP3Q8WTV1 239 aaPredicted RBP16.82■□□□□ 0.28
SMN2-213ENST00000614240 GPR137Q96N19 417 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 FAM167BQ9BTA0 163 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 HES7Q9BYE0 225 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 MMP25Q9NPA2 562 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 PDE10AQ9Y233 779 aa16.82■□□□□ 0.28
SMN2-213ENST00000614240 ZNF860A6NHJ4 632 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 C8GP07360 202 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 HIST1H2AGP0C0S8 130 aaPredicted RBP16.81■□□□□ 0.28
SMN2-213ENST00000614240 CCDC175P0C221 793 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 CDH1P12830 882 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 POU3F2P20265 443 aaPredicted RBP16.81■□□□□ 0.28
SMN2-213ENST00000614240 HIST1H2ADP20671 130 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 CCND1P24385 295 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 OR4D2P58180 307 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 ADORA2A-AS1P86434 159 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 MBOAT1Q6ZNC8 495 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 PCGF5Q86SE9 256 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 PDSS2Q86YH6 399 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 SPPL2CQ8IUH8 684 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 MYO1HQ8N1T3 1032 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 MFSD9Q8NBP5 474 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 MCUQ8NE86 351 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 TRIM58Q8NG06 486 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 EEF1AKMT1Q8WVE0 214 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 MAGOHBQ96A72 148 aaKnown RBP16.81■□□□□ 0.28
SMN2-213ENST00000614240 TM4SF19Q96DZ7 209 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 HIST1H2AHQ96KK5 128 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 LURAP1Q96LR2 239 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 SERPINB12Q96P63 405 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 OR1F2PQ96R84 312 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 HIST1H2AJQ99878 128 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 AARSD1Q9BTE6 412 aaKnown RBP16.81■□□□□ 0.28
SMN2-213ENST00000614240 H2AFJQ9BTM1 129 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 PARVBQ9HBI1 364 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
SMN2-213ENST00000614240 IARS2Q9NSE4 1012 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms