RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 C2orf49Q9BVC5 232 aaPredicted RBP10.84□□□□□ -0.67
ATF3-211ENST00000613954 SPATA9Q9BWV2 254 aa10.84□□□□□ -0.67
ATF3-211ENST00000613954 APOL5Q9BWW9 433 aa10.84□□□□□ -0.67
ATF3-211ENST00000613954 SMG9Q9H0W8 520 aaKnown RBP10.84□□□□□ -0.67
ATF3-211ENST00000613954 SIAEQ9HAT2 523 aa10.84□□□□□ -0.67
ATF3-211ENST00000613954 NEK6Q9HC98 313 aa10.84□□□□□ -0.67
ATF3-211ENST00000613954 PSORS1C1Q9UIG5 152 aa10.84□□□□□ -0.67
ATF3-211ENST00000613954 SNX6Q9UNH7 406 aa10.84□□□□□ -0.67
ATF3-211ENST00000613954 HELZP42694 1942 aaKnown RBP10.83□□□□□ -0.68
ATF3-211ENST00000613954 FAM172BPA6NC97 362 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 NPIPB8E9PQR5 432 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 LOC110117498-PIK3R3F6TDL0 507 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 hCG_2039718K7EN88 272 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 PSMD11O00231 422 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 PLK4O00444 970 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
ATF3-211ENST00000613954 STK16O75716 305 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 KRT75O95678 551 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 SOX6P35712 828 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 GGT5P36269 586 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 PXNP49023 591 aaPredicted RBP10.83□□□□□ -0.68
ATF3-211ENST00000613954 VEZF1Q14119 521 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 LAPTM4AQ15012 233 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 GGTA1PQ4G0N0 100 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 PRSS36Q5K4E3 855 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 DESI1Q6ICB0 168 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 ZCCHC8Q6NZY4 707 aaKnown RBP10.83□□□□□ -0.68
ATF3-211ENST00000613954 CCBE1Q6UXH8 406 aaPredicted RBP10.83□□□□□ -0.68
ATF3-211ENST00000613954 LINGO4Q6UY18 593 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 TPGS1Q6ZTW0 290 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 METTL4Q8N3J2 472 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 CPA6Q8N4T0 437 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 PAF1Q8N7H5 531 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 OR10Q1Q8NGQ4 319 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 FIBINQ8TAL6 211 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 ATL1Q8WXF7 558 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 PIK3R3Q92569 461 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 DNASE1L2Q92874 299 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 CMTM7Q96FZ5 175 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 HSH2DQ96JZ2 352 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 HHIPQ96QV1 700 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 ACPTQ9BZG2 426 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 GPR63Q9BZJ6 419 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 OR2B2Q9GZK3 357 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 LHX3Q9UBR4 397 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.83□□□□□ -0.684e-16■■■■■ 69.3
ATF3-211ENST00000613954 CCL26Q9Y258 94 aa10.83□□□□□ -0.68
ATF3-211ENST00000613954 CLCA1A8K7I4 914 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 M0R082 166 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CLIC1O00299 241 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ZNF197O14709 1029 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 PRMT3O60678 531 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CCNKO75909 580 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 EPN2O95208 641 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 SLC25A14O95258 325 aaPredicted RBP10.82□□□□□ -0.68
ATF3-211ENST00000613954 CDK1P06493 297 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ANXA5P08758 320 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 DBTP11182 482 aaKnown RBP10.82□□□□□ -0.68
ATF3-211ENST00000613954 CTPS1P17812 591 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ALOX12P18054 663 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 GPX2P18283 190 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 GADD45AP24522 165 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 TGFBR1P36897 503 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CDKN2CP42773 168 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 GDF5P43026 501 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 KIR3DL1P43629 444 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 VLDLRP98155 873 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 MTAPQ13126 283 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 EIF4HQ15056 248 aaKnown RBP10.82□□□□□ -0.68
ATF3-211ENST00000613954 DUOXA1Q1HG43 343 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 TIMM50Q3ZCQ8 353 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 SPANXN2Q5MJ10 180 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 AGAP6Q5VW22 663 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 RETSATQ6NUM9 610 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ZNF544Q6NX49 715 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 NEK5Q6P3R8 708 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ANKRD46Q86W74 232 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 SERPINA9Q86WD7 417 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ZSWIM9Q86XI8 627 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CCDC71Q8IV32 467 aaPredicted RBP10.82□□□□□ -0.68
ATF3-211ENST00000613954 ZZZ3Q8IYH5 903 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ZBTB2Q8N680 514 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 SELENOMQ8WWX9 145 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CRELD1Q96HD1 420 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 MAGEB10Q96LZ2 347 aaPredicted RBP10.82□□□□□ -0.68
ATF3-211ENST00000613954 COL21A1Q96P44 957 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 AGAP4Q96P64 663 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 SMIM14Q96QK8 99 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CCDC32Q9BV29 185 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CDADC1Q9BWV3 514 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 ELOVL6Q9H5J4 265 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 TDP1Q9NUW8 608 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 FKBP14Q9NWM8 211 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 SPASTQ9UBP0 616 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
ATF3-211ENST00000613954 TMEM98Q9Y2Y6 226 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 PCDHGB3Q9Y5G1 929 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 PCDHGA6Q9Y5G7 932 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 KLK4Q9Y5K2 254 aa10.82□□□□□ -0.68
ATF3-211ENST00000613954 CENPBD1B2RD01 187 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms