RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 AP1M2Q9Y6Q5 423 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 OTOGLQ3ZCN5 2332 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 A0A0J9YVX5 310 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CASC3O15234 703 aaKnown RBP16.78■□□□□ 0.28
SREK1-216ENST00000612404 IDO1P14902 403 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 PRPH2P23942 346 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CD1CP29017 333 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 AHRP35869 848 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 ACSM2AQ08AH3 577 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 ZIC1Q15915 447 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 PROX2Q3B8N5 592 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 IL23RQ5VWK5 629 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 ACSM2BQ68CK6 577 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 FBXO42Q6P3S6 717 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 PLXDC1Q8IUK5 500 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 C19orf47Q8N9M1 422 aaKnown RBP16.78■□□□□ 0.28
SREK1-216ENST00000612404 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 MACROD1Q9BQ69 325 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CCDC3Q9BQI4 270 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 EDEM2Q9BV94 578 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 SARGQ9BW04 601 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CCDC106Q9BWC9 280 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 RAB33BQ9H082 229 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 SEMA4GQ9NTN9 838 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 NOP53Q9NZM5 478 aaKnown RBP16.78■□□□□ 0.28
SREK1-216ENST00000612404 EPHA6Q9UF33 1036 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 EIF3LQ9Y262 564 aaKnown RBP16.78■□□□□ 0.28
SREK1-216ENST00000612404 EP300Q09472 2414 aaPredicted RBP16.78■□□□□ 0.28
SREK1-216ENST00000612404 TLCD2A6NGC4 264 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 NDUFS4O43181 175 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 UBOX5O94941 541 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CKMT1AP12532 417 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 SQLEQ14534 574 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CPSF7Q8N684 471 aaKnown RBP16.78■□□□□ 0.28
SREK1-216ENST00000612404 TRPV3Q8NET8 790 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 IFI44Q8TCB0 444 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 RHBDD1Q8TEB9 315 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CREB3L4Q8TEY5 395 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 F2RL3Q96RI0 385 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 ZFYVE21Q9BQ24 234 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 MS4A8Q9BY19 250 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 IRF2BPLQ9H1B7 796 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 ZNF385DQ9H6B1 395 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 SYNDIG1Q9H7V2 258 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 SYNPO2LQ9H987 977 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 RXFP3Q9NSD7 469 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CAPN7Q9Y6W3 813 aa16.78■□□□□ 0.28
SREK1-216ENST00000612404 CDX4O14627 284 aaPredicted RBP16.77■□□□□ 0.28
SREK1-216ENST00000612404 CLEC3AO75596 197 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 LMNAP02545 664 aaKnown RBP16.77■□□□□ 0.28
SREK1-216ENST00000612404 DUSP3P51452 185 aaPredicted RBP16.77■□□□□ 0.28
SREK1-216ENST00000612404 CFHR1Q03591 330 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 KIAA0040Q15053 153 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 GSTA3Q16772 222 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 SMU1Q2TAY7 513 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 SNAP47Q5SQN1 464 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 CACHD1Q5VU97 1274 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 KHDRBS2Q5VWX1 349 aaKnown RBP16.77■□□□□ 0.28
SREK1-216ENST00000612404 CCDC121Q6ZUS5 278 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 TREML1Q86YW5 311 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 C1orf52Q8N6N3 182 aaKnown RBP16.77■□□□□ 0.28
SREK1-216ENST00000612404 SLC13A3Q8WWT9 602 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 AIG1Q9NVV5 245 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 TMED5Q9Y3A6 229 aa16.77■□□□□ 0.28
SREK1-216ENST00000612404 NPIPB8E9PQR5 432 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 FLRT2O43155 660 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 TBX6O95947 436 aaPredicted RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 G6PDP11413 515 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 GSTM2P28161 218 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 CSF2RBP32927 897 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 TBL3Q12788 808 aaKnown RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 KLF10Q13118 480 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 CUL3Q13618 768 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 SPIN4Q56A73 249 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 MIER2Q8N344 545 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 RERGQ96A58 199 aaPredicted RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 CNDP2Q96KP4 475 aaKnown RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 OR2A5Q96R48 311 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 CD180Q99467 661 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 CENPKQ9BS16 269 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 SOHLH2Q9NX45 425 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 TMEM9Q9P0T7 183 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 PILRAQ9UKJ1 303 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 PPT2Q9UMR5 302 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 IGHV5-51A0A0C4DH38 117 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 CAPN14A8MX76 684 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 PSMD12O00232 456 aaPredicted RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 MYO1DO94832 1006 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 LDOC1O95751 146 aaPredicted RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 RPLP0P05388 317 aaKnown RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 MAPK1P28482 360 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 RAP1GDS1P52306 607 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 CCL7P80098 99 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 DEPDC1Q5TB30 811 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 FRMPD2BQ6IN97 320 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 NOXRED1Q6NXP6 359 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 WDR74Q6RFH5 385 aaPredicted RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 DBX2Q6ZNG2 339 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 ASPGQ86U10 573 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms