RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 REEP4Q9H6H4 257 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 CPNE5Q9HCH3 593 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 B3GNT3Q9Y2A9 372 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 GRIP1Q9Y3R0 1128 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 PCDHB11Q9Y5F2 797 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 LOXHD1Q8IVV2 1947 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 OR6C70A6NIJ9 312 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 ZBTB42B2RXF5 422 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 ARNTLO00327 626 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 C6orf47O95873 294 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 ECDO95905 644 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 PEPDP12955 493 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 NCBP2P52298 156 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 FADDQ13158 208 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 GK3PQ14409 553 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RNASE12Q5GAN4 147 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 GPRC6AQ5T6X5 926 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 REEP3Q6NUK4 255 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RTL4Q6ZR62 310 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 SNX33Q8WV41 574 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 TRNT1Q96Q11 434 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 PHOX2BQ99453 314 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 PDCD10Q9BUL8 212 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RNF208Q9H0X6 261 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 CLEC4AQ9UMR7 237 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 GPR45Q9Y5Y3 372 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 DLEC1Q9Y238 1755 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 TSPAN9O75954 239 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RAB36O95755 333 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 BDKRB1P46663 353 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 FOXA1P55317 472 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RPS3AP61247 264 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RPS13P62277 151 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 CSTF1Q05048 431 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 KEAP1Q14145 624 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 FAM171BQ6P995 826 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 RGMAQ96B86 450 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 FAM129BQ96TA1 746 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 DSN1Q9H410 356 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 ZSCAN32Q9NX65 697 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 FBXW2Q9UKT8 454 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 PCDHGB1Q9Y5G3 927 aa10.57□□□□□ -0.72
CDC42EP3-206ENST00000611976 DAPL1A0PJW8 107 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 DUXAA6NLW8 204 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 VILLO15195 856 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CCL16O15467 120 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 BCAS1O75363 584 aaPredicted RBP10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CNMDO75829 334 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 DCKP27707 260 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CD40LGP29965 261 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 DGKGP49619 791 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 STARP49675 285 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 RELAQ04206 551 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 PAMR1Q6UXH9 720 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 MARCH9Q86YJ5 346 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 ARHGAP12Q8IWW6 846 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 LSMEM2Q8N112 164 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 POMGNT2Q8NAT1 580 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 OR10H4Q8NGA5 316 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 MRPS33Q9Y291 106 aaKnown RBP10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 POLR1DQ9Y2S0 133 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 COLEC10Q9Y6Z7 277 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 ENTPD6O75354 484 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 MTX2O75431 263 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 PTTG1O95997 202 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 IFNA16P05015 189 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 JUPP14923 745 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CTNNB1P35222 781 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 MAGEA12P43365 314 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CD97P48960 835 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CBLBQ13191 982 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 SLC9A5Q14940 896 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 C22orf39Q6P5X5 142 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 XKRXQ6PP77 449 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 SLITRK4Q8IW52 837 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 LILRA2Q8N149 483 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 ACVR1CQ8NER5 493 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 OR4C6Q8NH72 309 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 PIP5K1AQ99755 562 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 ASPNQ9BXN1 380 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 POLE4Q9NR33 117 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 LAMB2P55268 1798 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 C7orf72A4D263 438 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 NFATC1O95644 943 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 DCTP40126 519 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 ADAM15Q13444 863 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 METTL2BQ6P1Q9 378 aaKnown RBP10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 RNF130Q86XS8 419 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 TMC8Q8IU68 726 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 WFIKKN2Q8TEU8 576 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 NUS1Q96E22 293 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 BRINP2Q9C0B6 783 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 GORASP2Q9H8Y8 452 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 IL36AQ9UHA7 158 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 FBXO10Q9UK96 956 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 A0A1W2PQ72 361 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 GNAO1P09471 354 aa10.56□□□□□ -0.72
CDC42EP3-206ENST00000611976 KCNA5P22460 613 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms