RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SRPRAP08240 638 aaKnown RBP14.18□□□□□ -0.14
VPS36-207ENST00000611132 ACSL1P33121 698 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 PSMD8P48556 350 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 TMEM44Q2T9K0 475 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 SPIN4Q56A73 249 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 LINC00299Q6ZSB3 139 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 B3GNT8Q7Z7M8 397 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 TICAM1Q8IUC6 712 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 ARHGAP12Q8IWW6 846 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 HEBP1Q9NRV9 189 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 CD84Q9UIB8 345 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 ERVW-1Q9UQF0 538 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 GABARAPO95166 117 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 PDYNP01213 254 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 POLR2IP36954 125 aaKnown RBP14.18□□□□□ -0.14
VPS36-207ENST00000611132 PIK3CBP42338 1070 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 SSR2P43308 183 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 SEMG2Q02383 582 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 GJD3Q8N144 294 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 GPR150Q8NGU9 434 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 PIGXQ8TBF5 258 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 SMG7Q92540 1137 aaKnown RBP14.18□□□□□ -0.14
VPS36-207ENST00000611132 DPH2Q9BQC3 489 aaPredicted RBP14.18□□□□□ -0.14
VPS36-207ENST00000611132 CCSER2Q9H7U1 834 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 CTPS2Q9NRF8 586 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 COMMD9Q9P000 198 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 OARD1Q9Y530 152 aa14.18□□□□□ -0.14
VPS36-207ENST00000611132 A0A0D9SEW6 157 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 ISM1B1AKI9 464 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 PIM1P11309 404 aaPredicted RBP14.17□□□□□ -0.14
VPS36-207ENST00000611132 PEPDP12955 493 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 POM121L1PQ3SYA9 428 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 LIPKQ5VXJ0 399 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 FAM20CQ8IXL6 584 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 PLD4Q96BZ4 506 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 SLA2Q9H6Q3 261 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 CLDN24A6NM45 220 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 UBFD1O14562 309 aaKnown RBP14.17□□□□□ -0.14
VPS36-207ENST00000611132 IDUAP35475 653 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 GPR1P46091 355 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 EXOC3L2Q2M3D2 409 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 LIN54Q6MZP7 749 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 DPY19L3Q6ZPD9 716 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 NUDT18Q6ZVK8 323 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 SLC24A5Q71RS6 500 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 DNAJB7Q7Z6W7 309 aaPredicted RBP14.17□□□□□ -0.14
VPS36-207ENST00000611132 DENND6BQ8NEG7 585 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 IGSF8Q969P0 613 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 RACGAP1Q9H0H5 632 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 OR51E2Q9H255 320 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 STARD7Q9NQZ5 370 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 TMEM221A6NGB7 291 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 CPNE6O95741 557 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 RGS8P57771 180 aaPredicted RBP14.17□□□□□ -0.14
VPS36-207ENST00000611132 SELPLGQ14242 412 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 PPP2R2DQ66LE6 453 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 RAET1GQ6H3X3 334 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 GPR78Q96P69 363 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 GSDMCQ9BYG8 508 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 ABCB8Q9NUT2 735 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 RHCGQ9UBD6 479 aa14.17□□□□□ -0.14
VPS36-207ENST00000611132 KDELR3O43731 214 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 PRLP01236 227 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 STOMP27105 288 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 PCBP2Q15366 365 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS36-207ENST00000611132 FAM110CQ1W6H9 321 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 RUNDC3AQ59EK9 446 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 C9orf64Q5T6V5 341 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 GALNT7Q86SF2 657 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 KLHL36Q8N4N3 616 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 AIF1LQ9BQI0 150 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 MRPL17Q9NRX2 175 aaKnown RBP14.16□□□□□ -0.14
VPS36-207ENST00000611132 LDB2O43679 373 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 GSRP00390 522 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 CASP3P42574 277 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 USP41Q3LFD5 358 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 ADNP2Q6IQ32 1131 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 METTL4Q8N3J2 472 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 PARP16Q8N5Y8 322 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 ZNF557Q8N988 423 aaPredicted RBP14.16□□□□□ -0.14
VPS36-207ENST00000611132 SLC43A3Q8NBI5 491 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 SETD6Q8TBK2 473 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 SIPA1Q96FS4 1042 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 CLDN7O95471 211 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 RLN1P04808 185 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 CREMQ03060 361 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 KCNC4Q03721 635 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 C9orf131Q5VYM1 1079 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS36-207ENST00000611132 TSSK6Q9BXA6 273 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 DPAGT1Q9H3H5 408 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 NUFIP1Q9UHK0 495 aaKnown RBP14.16□□□□□ -0.14
VPS36-207ENST00000611132 PCDHB11Q9Y5F2 797 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 CORINQ9Y5Q5 1042 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 SAP18O00422 153 aaKnown RBP14.16□□□□□ -0.14
VPS36-207ENST00000611132 C18orf21Q32NC0 220 aaPredicted RBP14.16□□□□□ -0.14
VPS36-207ENST00000611132 GPR149Q86SP6 731 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 BPIFB1Q8TDL5 484 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 BRINP2Q9C0B6 783 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms