RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ABCG2Q9UNQ0 655 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 RNF6Q9Y252 685 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ANGPT4Q9Y264 503 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 PCDHGB3Q9Y5G1 929 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 PABPC1P11940 636 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 TYRP14679 529 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 PPP2R1BP30154 601 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 RPL34P49207 117 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SRP54P61011 504 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SRSF11Q05519 484 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 VMACQ2NL98 169 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 IFI44LQ53G44 452 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 GPRC6AQ5T6X5 926 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 FAM46CQ5VWP2 391 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 RFLNAQ6ZTI6 216 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 TICAM1Q8IUC6 712 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ZZZ3Q8IYH5 903 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ZNF557Q8N988 423 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 CXorf40BQ96DE9 158 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 FEVQ99581 238 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 BARD1Q99728 777 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 DPEP2Q9H4A9 486 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SUV39H2Q9H5I1 410 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ZNF385DQ9H6B1 395 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 TIGARQ9NQ88 270 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 DNAJC27Q9NZQ0 273 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 IL17CQ9P0M4 197 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 RUVBL1Q9Y265 456 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 LAMP1P11279 417 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 BPIP17213 487 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 DDX5P17844 614 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 HOXD9P28356 352 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 TGFBR1P36897 503 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 MAGEA10P43363 369 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 MAPK8P45983 427 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 DUOXA1Q1HG43 343 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 GPAT3Q53EU6 434 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 PYCR3Q53H96 274 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 LYPLAL1Q5VWZ2 237 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ATL1Q8WXF7 558 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SLC39A13Q96H72 371 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 MGME1Q9BQP7 344 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SLC35A5Q9BS91 424 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 RIOK2Q9BVS4 552 aaKnown RBP10.03□□□□□ -0.8
CTCFL-216ENST00000608263 C1QTNF7Q9BXJ2 289 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ITPAQ9BY32 194 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 TBCCD1Q9NVR7 557 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 ZDHHC3Q9NYG2 299 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 SEC14L3Q9UDX4 400 aa10.03□□□□□ -0.8
CTCFL-216ENST00000608263 GSAPA4D1B5 854 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 ZNF840PA6NDX5 716 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 TNFRSF10BO14763 440 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 ADAMDEC1O15204 470 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 PSIP1O75475 530 aaKnown RBP10.02□□□□□ -0.8
CTCFL-216ENST00000608263 IFNW1P05000 195 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 RPS13P62277 151 aaKnown RBP10.02□□□□□ -0.8
CTCFL-216ENST00000608263 RPS26P62854 115 aaKnown RBP10.02□□□□□ -0.8
CTCFL-216ENST00000608263 PLEKHG6Q3KR16 790 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 XKR4Q5GH76 650 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 DDI2Q5TDH0 399 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 ANXA8L1Q5VT79 327 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 CCDC80Q76M96 950 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 SPRED1Q7Z699 444 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 WDR48Q8TAF3 677 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 BPIFB1Q8TDL5 484 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 POLR2J2Q9GZM3 115 aaKnown RBP10.02□□□□□ -0.8
CTCFL-216ENST00000608263 MTG2Q9H4K7 406 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 IKZF5Q9H5V7 419 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 SOHLH2Q9NX45 425 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 B4GALT6Q9UBX8 382 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 ITGB1BP2Q9UKP3 347 aa10.02□□□□□ -0.8
CTCFL-216ENST00000608263 DNMT3AQ9Y6K1 912 aaPredicted RBP10.02□□□□□ -0.8
CTCFL-216ENST00000608263 TTC28Q96AY4 2481 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 TGM5O43548 720 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 C6orf47O95873 294 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 KLK1P06870 262 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 ALPPL2P10696 532 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 ITGA2P17301 1181 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 HMGCLP35914 325 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
CTCFL-216ENST00000608263 IL18R1Q13478 541 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 RAB30Q15771 203 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 KRT73Q86Y46 540 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 OR2AP1Q8NGE2 309 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 FOXJ1Q92949 421 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 OSBPL10Q9BXB5 764 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 RBM38Q9H0Z9 239 aaKnown RBP10.02□□□□□ -0.81
CTCFL-216ENST00000608263 KCNH6Q9H252 994 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 ZBTB20Q9HC78 741 aaPredicted RBP10.02□□□□□ -0.81
CTCFL-216ENST00000608263 SEMA3GQ9NS98 782 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 SSR3Q9UNL2 185 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 SGTAO43765 313 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 OAZ2O95190 189 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 NPPAP01160 153 aa10.02□□□□□ -0.81
CTCFL-216ENST00000608263 NUDT7P0C024 238 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms