RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 FFAR3O14843 346 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 GPR42O15529 346 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 RIPK2O43353 540 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 FOXS1O43638 330 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 CCNT2O60583 730 aaKnown RBP26.78■■□□□ 1.88
SSBP4-206ENST00000599699 CNTFP26441 200 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 VARSP26640 1264 aaKnown RBP26.78■■□□□ 1.88
SSBP4-206ENST00000599699 CCL11P51671 97 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 RRADP55042 308 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 TMEM214Q6NUQ4 689 aaKnown RBP26.78■■□□□ 1.88
SSBP4-206ENST00000599699 KCT2Q8NC54 265 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 OR9A4Q8NGU2 314 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 STT3BQ8TCJ2 826 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 DCAKDQ8WVC6 231 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 SARGQ9BW04 601 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 ZNF71Q9NQZ8 489 aaPredicted RBP26.78■■□□□ 1.88
SSBP4-206ENST00000599699 ZNF180Q9UJW8 692 aa26.78■■□□□ 1.88
SSBP4-206ENST00000599699 VSTM2BA6NLU5 285 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 SYCE1LA8MT33 242 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 KLHL2O95198 593 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 ZGLP1P0C6A0 271 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 C1GALT1C1LP0DN25 315 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 SCTRP47872 440 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 CSRP3P50461 194 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 ACAP2Q15057 778 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 MED25Q71SY5 747 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 PPP1R32Q7Z5V6 425 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 TMEM102Q8N9M5 508 aaPredicted RBP26.77■■□□□ 1.88
SSBP4-206ENST00000599699 ATOH8Q96SQ7 321 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 CRB3Q9BUF7 120 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 ANKHQ9HCJ1 492 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 GPRC5BQ9NZH0 403 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 ZFP69BQ9UJL9 534 aa26.77■■□□□ 1.88
SSBP4-206ENST00000599699 TRIM49D1C9J1S8 452 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 CLGNO14967 610 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 IL1RNP18510 177 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 CXCR2P25025 360 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 AHRP35869 848 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 KLC1Q07866 573 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 RGS1Q08116 209 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 PDK4Q16654 411 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 VWA2Q5GFL6 755 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 LGSNQ5TDP6 509 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 SLCO4C1Q6ZQN7 724 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 AMER3Q8N944 861 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 RHEBL1Q8TAI7 183 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 MOCOSQ96EN8 888 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 FER1L6-AS2Q96M78 137 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 CD244Q9BZW8 370 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 P4HTMQ9NXG6 502 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 MAP4K5Q9Y4K4 846 aa26.76■■□□□ 1.87
SSBP4-206ENST00000599699 ZNF500O60304 480 aaPredicted RBP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 NSA2O95478 260 aaKnown RBP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 IGHEP01854 428 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 MMP11P24347 488 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 SNRPNP63162 240 aaKnown RBP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 MAT1AQ00266 395 aaKnown RBP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 PWP1Q13610 501 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 SLBPQ14493 270 aaKnown RBP eCLIP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 RBBP7Q16576 425 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 SYT16Q17RD7 645 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 ATG9BQ674R7 924 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 PRSS41Q7RTY9 318 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 EIF1ADQ8N9N8 165 aaKnown RBP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 MKKSQ9NPJ1 570 aaPredicted RBP26.75■■□□□ 1.87
SSBP4-206ENST00000599699 SEMA3GQ9NS98 782 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 C3orf18Q9UK00 162 aa26.75■■□□□ 1.87
SSBP4-206ENST00000599699 CCDC189A1A4V9 331 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 A6NL46 340 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 H0YIG0 161 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 SNRPAP09012 282 aaKnown RBP26.74■■□□□ 1.87
SSBP4-206ENST00000599699 MYBL2P10244 700 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 GFAPP14136 432 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 SLC29A2Q14542 456 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 LACTB2Q53H82 288 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-206ENST00000599699 LRRC70Q7Z2Q7 622 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 KRT78Q8N1N4 520 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 ANKRD53Q8N9V6 530 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 TRPV3Q8NET8 790 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 TXLNGYQ9BZA5 131 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 C14orf105Q9NVL8 296 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 HEMK1Q9Y5R4 338 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-206ENST00000599699 BOD1L1Q8NFC6 3051 aa26.74■■□□□ 1.87
SSBP4-206ENST00000599699 CCDC88CQ9P219 2028 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 IGLV3-12A0A075B6K2 115 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 SGK494L7N484 410 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 AGTR2P50052 363 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 HERC3Q15034 1050 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 XKR6Q5GH73 641 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 CLEC1AQ8NC01 280 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 NT5CQ8TCD5 201 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 ISL2Q96A47 359 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 NACC2Q96BF6 587 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 SCYL1Q96KG9 808 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 SLC25A23Q9BV35 468 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 PRM3Q9NNZ6 103 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 HCN3Q9P1Z3 774 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 OPTCQ9UBM4 332 aa26.73■■□□□ 1.87
SSBP4-206ENST00000599699 G3BP2Q9UN86 482 aaKnown RBP26.73■■□□□ 1.87
SSBP4-206ENST00000599699 TP53TG5Q9Y2B4 290 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms