RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PCM1Q15154 2024 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 ZSCAN5BA6NJL1 495 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 CPNE3O75131 537 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 EPB42P16452 691 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 GABRB1P18505 474 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 HOXD9P28356 352 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 HOXD10P28358 340 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 RPS19P39019 145 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 KCNJ10P78508 379 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 DSC1Q08554 894 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 C19orf57Q0VDD7 668 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 DMC1Q14565 340 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 C11orf74Q86VG3 221 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 ELMOD2Q8IZ81 293 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 SPON2Q9BUD6 331 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 BARHL1Q9BZE3 327 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 ABCB8Q9NUT2 735 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 SCML2Q9UQR0 700 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 PCDHGB3Q9Y5G1 929 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 CFAP20Q9Y6A4 193 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 GREB1Q4ZG55 1949 aa18.66■□□□□ 0.58
ARHGEF1-218ENST00000599589 A0A0X1KG70 313 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 LOC105371267A0A1B0GV96 52 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 H3BM21 787 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 NBNO60934 754 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 ENDOUP21128 410 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 AQP1P29972 269 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 CSTF3Q12996 717 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 SSX1Q16384 188 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 TIMM50Q3ZCQ8 353 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 ZNF648Q5T619 568 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 OR52J3Q8NH60 311 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 GPR152Q8TDT2 470 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 TESCQ96BS2 214 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 COQ8BQ96D53 544 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 ASPNQ9BXN1 380 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 PCDHGA2Q9Y5H1 932 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 TNFRSF11BO00300 401 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 SCAMP3O14828 347 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 B4GALT3O60512 393 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 EPN2O95208 641 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 KRT6AP02538 564 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 KRT6BP04259 564 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 PRPS2P11908 318 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 RPS5P46782 204 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 MAPKAPK2P49137 400 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 SMARCB1Q12824 385 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 HYAL2Q12891 473 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 MBTPS1Q14703 1052 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 EIF4HQ15056 248 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 DUOXA1Q1HG43 343 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 CLLU1OSQ5K130 101 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 ERICH5Q6P6B1 374 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 C19orf48Q6RUI8 117 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 TMPRSS11AQ6ZMR5 421 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 DEPDC4Q8N2C3 294 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 TP53I13Q8NBR0 393 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 VANGL1Q8TAA9 524 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 SELENOMQ8WWX9 145 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 DUSP12Q9UNI6 340 aa18.65■□□□□ 0.58
ARHGEF1-218ENST00000599589 TMEM189-UBE2V1I3L0A0 370 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 OAZ2O95190 189 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 CPSF4O95639 269 aaKnown RBP18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 GPX2P18283 190 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 IFNA8P32881 189 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 KIR3DL1P43629 444 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 CRYBA2P53672 197 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 TOR1AIP1Q5JTV8 583 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 NADSYN1Q6IA69 706 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 OR10G2Q8NGC3 310 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 ANGPTL6Q8NI99 470 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 PSKH2Q96QS6 385 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 NIPSNAP1Q9BPW8 284 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 BOCQ9BWV1 1114 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 CLDN9O95484 217 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 NUDT7P0C024 238 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 OR1G1P47890 313 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 TGM4P49221 684 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 PPIGQ13427 754 aaKnown RBP eCLIP18.64■□□□□ 0.572e-7■■■□□ 15.8
ARHGEF1-218ENST00000599589 RNF130Q86XS8 419 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 SLC38A6Q8IZM9 456 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 STK40Q8N2I9 435 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 UBASH3BQ8TF42 649 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 APIPQ96GX9 242 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 SRRQ9GZT4 340 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 TLR8Q9NR97 1041 aaKnown RBP18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 IMPAD1Q9NX62 359 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 TOR4AQ9NXH8 423 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 UBA2Q9UBT2 640 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 RAI2Q9Y5P3 530 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 THSD7BQ9C0I4 1608 aa18.64■□□□□ 0.57
ARHGEF1-218ENST00000599589 CCDC182A6NF36 153 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 MAGEB17A8MXT2 336 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 UPK3BL1B0FP48 263 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 ANKRD66B4E2M5 251 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 UPK3BL2E5RIL1 263 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 ZXDBP98169 803 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 ARHGEF7Q14155 803 aa18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 TSEN54Q7Z6J9 526 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-218ENST00000599589 PEX5LQ8IYB4 626 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms