RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 KIF1CO43896 1103 aaKnown RBP14.02□□□□□ -0.16
VRK3-212ENST00000596814 CTSVO60911 334 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 SH3BGRLO75368 114 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 SEC22BO75396 215 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 CLEC3AO75596 197 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 RASSF9O75901 435 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 LDOC1O95751 146 aaPredicted RBP14.02□□□□□ -0.16
VRK3-212ENST00000596814 TGFB1P01137 390 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 C9P02748 559 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 RPLP0P05388 317 aaKnown RBP14.02□□□□□ -0.16
VRK3-212ENST00000596814 ALDOCP09972 364 aaKnown RBP14.02□□□□□ -0.16
VRK3-212ENST00000596814 CFHR1Q03591 330 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 ZIC1Q15915 447 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 SMU1Q2TAY7 513 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.16
VRK3-212ENST00000596814 WDR74Q6RFH5 385 aaPredicted RBP14.02□□□□□ -0.16
VRK3-212ENST00000596814 USP53Q70EK8 1073 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 CHSY3Q70JA7 882 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 TRPM8Q7Z2W7 1104 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 SPATA19Q7Z5L4 167 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 CARFQ8N187 725 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 TRPV3Q8NET8 790 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 ERP27Q96DN0 273 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 THAP11Q96EK4 314 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 FCRL4Q96PJ5 515 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 C1orf50Q9BV19 199 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 MYLK2Q9H1R3 596 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 SAR1AQ9NR31 198 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 FTSJ1Q9UET6 329 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 KLHL3Q9UH77 587 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 PILRAQ9UKJ1 303 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 AP1M2Q9Y6Q5 423 aa14.02□□□□□ -0.16
VRK3-212ENST00000596814 A0A0J9YVX5 310 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 EBAG9O00559 213 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 PRAMEF10O60809 474 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SERPIND1P05546 499 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CD59P13987 128 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CKMT2P17540 419 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 PTX3P26022 381 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 EMX2Q04743 252 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 MAD2L1Q13257 205 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 UBAP2LQ14157 1087 aaKnown RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 RFTN2Q52LD8 501 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 CACHD1Q5VU97 1274 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 FBXO42Q6P3S6 717 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 NAXDQ8IW45 347 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 FITM2Q8N6M3 262 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CREB3L4Q8TEY5 395 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 APIPQ96GX9 242 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 METTL2AQ96IZ6 378 aaKnown RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 NUDT22Q9BRQ3 303 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 OR51B5Q9H339 312 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 LRRN3Q9H3W5 708 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 ZNF385DQ9H6B1 395 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SYNDIG1Q9H7V2 258 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SYNPO2LQ9H987 977 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 TMED5Q9Y3A6 229 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 POLR3HQ9Y535 204 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 IGHV5-51A0A0C4DH38 117 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 NDUFS4O43181 175 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 TBX6O95947 436 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 MLLT3P42568 568 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 STX1BP61266 288 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CCL7P80098 99 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SQSTM1Q13501 440 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CUL3Q13618 768 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SQLEQ14534 574 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SPIN4Q56A73 249 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 KHDRBS2Q5VWX1 349 aaKnown RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 VN1R4Q7Z5H5 301 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CLNKQ7Z7G1 428 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 ASPGQ86U10 573 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 RERGQ96A58 199 aaPredicted RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 TCTN2Q96GX1 697 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 OR2A5Q96R48 311 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 CENPKQ9BS16 269 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 MRPL1Q9BYD6 325 aaKnown RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 MRGBPQ9NV56 204 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 SOHLH2Q9NX45 425 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 NOP53Q9NZM5 478 aaKnown RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 TMEM9Q9P0T7 183 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 ARMCX1Q9P291 453 aa14.01□□□□□ -0.17
VRK3-212ENST00000596814 COPG1Q9Y678 874 aaKnown RBP14.01□□□□□ -0.17
VRK3-212ENST00000596814 A0A1W2PQM1 296 aa14□□□□□ -0.17
VRK3-212ENST00000596814 CCT8L1PA6NM43 557 aa14□□□□□ -0.17
VRK3-212ENST00000596814 CASC3O15234 703 aaKnown RBP14□□□□□ -0.17
VRK3-212ENST00000596814 SH3BP5O60239 455 aa14□□□□□ -0.17
VRK3-212ENST00000596814 SEMA3DO95025 777 aa14□□□□□ -0.17
VRK3-212ENST00000596814 ZBTB11O95625 1053 aaPredicted RBP14□□□□□ -0.17
VRK3-212ENST00000596814 CPNE6O95741 557 aa14□□□□□ -0.17
VRK3-212ENST00000596814 STATHP02808 62 aa14□□□□□ -0.17
VRK3-212ENST00000596814 SLC35G6P0C7Q6 338 aa14□□□□□ -0.17
VRK3-212ENST00000596814 IDO1P14902 403 aa14□□□□□ -0.17
VRK3-212ENST00000596814 ACP1P24666 158 aa14□□□□□ -0.17
VRK3-212ENST00000596814 MAPK1P28482 360 aa14□□□□□ -0.17
VRK3-212ENST00000596814 ATP4BP51164 291 aa14□□□□□ -0.17
VRK3-212ENST00000596814 DIO3P55073 304 aa14□□□□□ -0.17
VRK3-212ENST00000596814 IRX1P78414 480 aaPredicted RBP14□□□□□ -0.17
VRK3-212ENST00000596814 ACSM2AQ08AH3 577 aa14□□□□□ -0.17
VRK3-212ENST00000596814 TBL3Q12788 808 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms