RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 HIST1H2AGP0C0S8 130 aaPredicted RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 HIST1H2ADP20671 130 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 RPL21P46778 160 aaKnown RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 PGGT1BP53609 377 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 AP1S2P56377 157 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 Q0VFX4 171 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 CBLBQ13191 982 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 NAE1Q13564 534 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 FASTKD3Q14CZ7 662 aaKnown RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 NDUFA9Q16795 377 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 ZXDCQ2QGD7 858 aaPredicted RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 AGAP7PQ5VUJ5 663 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 IRAK1BP1Q5VVH5 260 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 LCTLQ6UWM7 567 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 PPP4R1Q8TF05 950 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 C8orf44Q96CB5 159 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 THAP11Q96EK4 314 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 HIST1H2AHQ96KK5 128 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 AGAP4Q96P64 663 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 HIST1H2AJQ99878 128 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 WDR77Q9BQA1 342 aaPredicted RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 H2AFJQ9BTM1 129 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 TRIM31Q9BZY9 425 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 MOCS1Q9NZB8 636 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 PSAT1Q9Y617 370 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 PRSS44E7EML9 344 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 PCDH17O14917 1159 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 NSA2O95478 260 aaKnown RBP12.5□□□□□ -0.41
H3F3B-213ENST00000593254 STATHP02808 62 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 ENO2P09104 434 aaPredicted RBP12.5□□□□□ -0.41
H3F3B-213ENST00000593254 COX6A1P12074 109 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 NPPBP16860 134 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 EMP2P54851 167 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
H3F3B-213ENST00000593254 SYT16Q17RD7 645 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 CAPN13Q6MZZ7 669 aaPredicted RBP12.5□□□□□ -0.41
H3F3B-213ENST00000593254 NDUFAF7Q7L592 441 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 ZC3H7AQ8IWR0 971 aaKnown RBP12.5□□□□□ -0.41
H3F3B-213ENST00000593254 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 OR56A3Q8NH54 315 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 FBXL8Q96CD0 374 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 TM4SF19Q96DZ7 209 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
H3F3B-213ENST00000593254 KRT12Q99456 494 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 HAUS8Q9BT25 410 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 FAM129AQ9BZQ8 928 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 ZNF160Q9HCG1 818 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 AGPAT4Q9NRZ5 378 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 ARL15Q9NXU5 204 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 SPG11Q96JI7 2443 aa12.5□□□□□ -0.41
H3F3B-213ENST00000593254 LOC102723996A0A087X1L8 192 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 IGHV1-45A0A0A0MS14 117 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 NSG1A0A0A6YYJ2 146 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 FEZF1A0PJY2 475 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 H0YIG0 161 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 NDC80O14777 642 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 LCMT2O60294 686 aaKnown RBP12.49□□□□□ -0.41
H3F3B-213ENST00000593254 BMP10O95393 424 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 HEXBP07686 556 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 CDH1P12830 882 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 ZNF37AP17032 561 aaPredicted RBP12.49□□□□□ -0.41
H3F3B-213ENST00000593254 CXCR2P25025 360 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 BCL6P41182 706 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 AVPR1BP47901 424 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 GLRBP48167 497 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 EFNA3P52797 238 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
H3F3B-213ENST00000593254 MGAT5Q09328 741 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 PPP1R3AQ16821 1122 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 TMEM214Q6NUQ4 689 aaKnown RBP12.49□□□□□ -0.41
H3F3B-213ENST00000593254 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 SBSNQ6UWP8 590 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 TMEM207Q6UWW9 146 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 PRSS41Q7RTY9 318 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 SLC26A11Q86WA9 606 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
H3F3B-213ENST00000593254 CAMKVQ8NCB2 501 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 ABHD11Q8NFV4 315 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 OR9A4Q8NGU2 314 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 ATL1Q8WXF7 558 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 ALKBH8Q96BT7 664 aaKnown RBP12.49□□□□□ -0.41
H3F3B-213ENST00000593254 PYCR2Q96C36 320 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 LURAP1Q96LR2 239 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 OR4K3Q96R72 315 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 MACROD1Q9BQ69 325 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 MCMBPQ9BTE3 642 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 SARGQ9BW04 601 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 OSGIN2Q9Y236 505 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 SNX24Q9Y343 169 aa12.49□□□□□ -0.41
H3F3B-213ENST00000593254 PABPN1LA6NDY0 278 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms