RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 RAB7BQ96AH8 199 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 HHIPQ96QV1 700 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 CSF3RQ99062 836 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 ZCCHC2Q9C0B9 1178 aaKnown RBP13.78□□□□□ -0.2
RANBP3-229ENST00000592771 HMG20AQ9NP66 347 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 NECTIN3Q9NQS3 549 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 WARS2Q9UGM6 360 aaKnown RBP13.78□□□□□ -0.2
RANBP3-229ENST00000592771 TMEFF2Q9UIK5 374 aaPredicted RBP13.78□□□□□ -0.2
RANBP3-229ENST00000592771 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 SNX6Q9UNH7 406 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 SLC22A14Q9Y267 594 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
RANBP3-229ENST00000592771 FUOMA2VDF0 154 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 KRT87PA6NCN2 255 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 CLDN25C9JDP6 229 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 BCKDKO14874 412 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 NPC1O15118 1278 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 LINC01565O15544 149 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 NOBOXO60393 691 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 FOXD2O60548 495 aaPredicted RBP13.77□□□□□ -0.21
RANBP3-229ENST00000592771 MMP20O60882 483 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 GABARAPO95166 117 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 KAT7O95251 611 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 PDYNP01213 254 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 CATP04040 527 aaKnown RBP13.77□□□□□ -0.21
RANBP3-229ENST00000592771 P2RY2P41231 377 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 PREPP48147 710 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 TRPC1P48995 793 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 BCAP31P51572 246 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 MVKQ03426 396 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 CDK5R2Q13319 367 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 RAB30Q15771 203 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 CPSF6Q16630 551 aaKnown RBP eCLIP13.77□□□□□ -0.21
RANBP3-229ENST00000592771 LAIR2Q6ISS4 152 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 ERICH5Q6P6B1 374 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 GALNT18Q6P9A2 607 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 SLC16A12Q6ZSM3 486 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 MMAAQ8IVH4 418 aaKnown RBP13.77□□□□□ -0.21
RANBP3-229ENST00000592771 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 ATL1Q8WXF7 558 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 LINC00615Q96LM1 132 aaPredicted RBP13.77□□□□□ -0.21
RANBP3-229ENST00000592771 MYADMQ96S97 322 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 TBCDQ9BTW9 1192 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 TM9SF3Q9HD45 589 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 CCNB1IP1Q9NPC3 277 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 SERHLQ9NQF3 203 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 DYRK4Q9NR20 520 aa13.77□□□□□ -0.21
RANBP3-229ENST00000592771 ANTXRLA6NF34 631 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 PRMT3O60678 531 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 DPM1O60762 260 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 FKBP9O95302 570 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 GPR1P46091 355 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 IST1P53990 364 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 PLIN5Q00G26 463 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 MLLT1Q03111 559 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 SGO1Q5FBB7 561 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 PIP5KL1Q5T9C9 394 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 EGFLAMQ63HQ2 1017 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 RAET1GQ6H3X3 334 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 KRTCAP2Q8N6L1 136 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ZBTB8BQ8NAP8 495 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 NETO1Q8TDF5 533 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ATG10Q9H0Y0 220 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 TRIM39Q9HCM9 518 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 STOX2Q9P2F5 926 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 RPS6KA6Q9UK32 745 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 LZTS3O60299 673 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 JUPP14923 745 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ITPKAP23677 461 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 IGFBP5P24593 272 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ACVR2AP27037 513 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 HTR1BP28222 390 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 CCR3P51677 355 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 RELAQ04206 551 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 LIPJQ5W064 366 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 CPZQ66K79 652 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 CAPN13Q6MZZ7 669 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 AGTRAPQ6RW13 159 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 YAF2Q8IY57 180 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 CHPFQ8IZ52 775 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 SVOPQ8N4V2 548 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 OR56A3Q8NH54 315 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 SELENOMQ8WWX9 145 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 SH3YL1Q96HL8 342 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ZNF514Q96K75 400 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 DUSP21Q9H596 190 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 ELOVL6Q9H5J4 265 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 SLC28A3Q9HAS3 691 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
RANBP3-229ENST00000592771 TDRKHQ9Y2W6 561 aaKnown RBP13.76□□□□□ -0.21
RANBP3-229ENST00000592771 CDH23Q9H251 3354 aa13.75□□□□□ -0.21
RANBP3-229ENST00000592771 VEGFDO43915 354 aa13.75□□□□□ -0.21
RANBP3-229ENST00000592771 ANGPTL1O95841 491 aa13.75□□□□□ -0.21
RANBP3-229ENST00000592771 EPHX1P07099 455 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms