RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 SLC35G6P0C7Q6 338 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 PCNAP12004 261 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 FOLR1P15328 257 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 CD22P20273 847 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 BCL6P41182 706 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ARFIP1P53367 373 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 RAB15P59190 212 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ARF3P61204 181 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 STXBP1P61764 594 aaKnown RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 MC2RQ01718 297 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 OCRLQ01968 901 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 RGS1Q08116 209 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 TGM3Q08188 693 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 GRM7Q14831 915 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 C16orf72Q14CZ0 275 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 TMEM35AQ53FP2 167 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 KANK2Q63ZY3 851 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 NIPAL1Q6NVV3 410 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 RAB11FIP2Q7L804 512 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 TMPRSS7Q7RTY8 843 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 TRIM46Q7Z4K8 759 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 B3GNT8Q7Z7M8 397 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ASPGQ86U10 573 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 WDR75Q8IWA0 830 aaKnown RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 RCBTB1Q8NDN9 531 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 SRFBP1Q8NEF9 429 aaKnown RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 HUS1BQ8NHY5 278 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 WDR36Q8NI36 951 aaKnown RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 WDR20Q8TBZ3 569 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 PIWIL2Q8TC59 973 aaKnown RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 SELENOMQ8WWX9 145 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 CMTM7Q96FZ5 175 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ZNF285Q96NJ3 590 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 SORT1Q99523 831 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 SERPINI1Q99574 410 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 CENPKQ9BS16 269 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ZPBPQ9BS86 351 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ASPSCR1Q9BZE9 553 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 B3GNT4Q9C0J1 378 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 C20orf27Q9GZN8 174 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 CXorf56Q9H5V9 222 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 ZDHHC2Q9UIJ5 367 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 RARRES3Q9UL19 164 aa10.2□□□□□ -0.78
SMAD4-214ENST00000592186 PTPRZ1P23471 2315 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-214ENST00000592186 A0A1B0GTL3 188 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TRPC5OSA6NMA1 111 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 EFCAB7A8K855 629 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TCP11X1B4DZS4 312 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 SLC28A1O00337 649 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 FFAR3O14843 346 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 POLR1CO15160 346 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 GPR42O15529 346 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 PRAMEF10O60809 474 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 LYPLA1O75608 230 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TGDSO95455 350 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 HBQ1P09105 142 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 JMJD7P0C870 316 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 FGF5P12034 268 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ARRB2P32121 409 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 CCR10P46092 362 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 GABRA4P48169 554 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 PDX1P52945 283 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ARSFP54793 590 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ITGA1P56199 1179 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 VSX2P58304 361 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 SKP1P63208 163 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 FOXM1Q08050 763 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 CSTF3Q12996 717 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TARDBPQ13148 414 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TUBB3Q13509 450 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 CUL3Q13618 768 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 UGT3A2Q3SY77 523 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 WASHC2DQ5SRD0 308 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TMEM164Q5U3C3 297 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 GARNL3Q5VVW2 1013 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 CES4AQ5XG92 561 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 PLD3Q8IV08 490 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 CSNK1A1LQ8N752 337 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ZNF781Q8N8C0 355 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ANKRD53Q8N9V6 530 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 NT5CQ8TCD5 201 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ZNF473Q8WTR7 871 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 USP7Q93009 1102 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 METTL2AQ96IZ6 378 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TEFMQ96QE5 360 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 OR6C1Q96RD1 312 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 SHCBP1LQ9BZQ2 653 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 SPNS1Q9H2V7 528 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 ZNF395Q9H8N7 513 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 SIDT1Q9NXL6 827 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 SLC39A1Q9NY26 324 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 AHSPQ9NZD4 102 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 TIMM22Q9Y584 194 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 DNAJC15Q9Y5T4 150 aa10.19□□□□□ -0.78
SMAD4-214ENST00000592186 GOLGA4Q13439 2230 aaKnown RBP10.19□□□□□ -0.78
SMAD4-214ENST00000592186 DMXL1Q9Y485 3027 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms