RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 NIPAL1Q6NVV3 410 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 B3GNT8Q7Z7M8 397 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 GPR135Q8IZ08 494 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 RCBTB1Q8NDN9 531 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 ZNF740Q8NDX6 193 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 SRFBP1Q8NEF9 429 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 HUS1BQ8NHY5 278 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 NT5CQ8TCD5 201 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 ZNF285Q96NJ3 590 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 SHCBP1LQ9BZQ2 653 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 NSRP1Q9H0G5 558 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 SPNS1Q9H2V7 528 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 FAM60AQ9NP50 221 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 DMRT3Q9NQL9 472 aa16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 ZNF490Q9ULM2 529 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 COL27A1Q8IZC6 1860 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-211ENST00000588907 CCDC187A0A096LP49 1063 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 H0YGG7 62 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 SLC28A1O00337 649 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 FFAR3O14843 346 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 HDAC3O15379 428 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 GPR42O15529 346 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 NDUFS4O43181 175 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 VPS4BO75351 444 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 PTX3P26022 381 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 LSP1P33241 339 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 ARF3P61204 181 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 PUM1Q14671 1186 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 GARNL3Q5VVW2 1013 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 CLEC6AQ6EIG7 209 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 TLDC1Q6P9B6 456 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 CHSY3Q70JA7 882 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 TRIM46Q7Z4K8 759 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 CSNK1A1LQ8N752 337 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 ANKRD53Q8N9V6 530 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 AGR3Q8TD06 166 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 ZNF473Q8WTR7 871 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 TWIST2Q8WVJ9 160 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 SLC13A3Q8WWT9 602 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 TM4SF19Q96DZ7 209 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 CHMP6Q96FZ7 201 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 METTL2AQ96IZ6 378 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 FCRL4Q96PJ5 515 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 KCNA7Q96RP8 456 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 SERPINI1Q99574 410 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 ZPBPQ9BS86 351 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 SLCO1B3Q9NPD5 702 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 FGF21Q9NSA1 209 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 SIDT1Q9NXL6 827 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 RARRES3Q9UL19 164 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 TIMM22Q9Y584 194 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 DNAJC15Q9Y5T4 150 aa16.21■□□□□ 0.19
SCAMP4-211ENST00000588907 MDC1Q14676 2089 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 ADAMTS20P59510 1910 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 A0A088AWK7 358 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 FITM1A5D6W6 292 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 TMEM150CB9EJG8 249 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 CASC3O15234 703 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 RGS14O43566 566 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 LCMT2O60294 686 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 SEMA3DO95025 777 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 ZNF10P21506 573 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 GABRA4P48169 554 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 FOXA1P55317 472 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 ITGA1P56199 1179 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 GNGT1P63211 74 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 CUL3Q13618 768 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 GRM7Q14831 915 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 C16orf72Q14CZ0 275 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 NDUFA9Q16795 377 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 IMPG1Q17R60 797 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 FAM47EQ6ZV65 393 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 VN1R4Q7Z5H5 301 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 ALYREFQ86V81 257 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 PLD3Q8IV08 490 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 LRRC34Q8IZ02 419 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 TTC29Q8NA56 475 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 WDR36Q8NI36 951 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 CREB3L4Q8TEY5 395 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 STON2Q8WXE9 905 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 C19orf60Q96EN9 201 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 ZNF317Q96PQ6 595 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 ZNF395Q9H8N7 513 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 FBXO8Q9NRD0 319 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 RIC8BQ9NVN3 520 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 IRAK4Q9NWZ3 460 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 AHSPQ9NZD4 102 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 SRPK3Q9UPE1 567 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 FIS1Q9Y3D6 152 aa16.2■□□□□ 0.18
SCAMP4-211ENST00000588907 CNOT1A5YKK6 2376 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 EFCAB7A8K855 629 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 NPIPB8E9PQR5 432 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 NRP2O60462 931 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 PRAMEF10O60809 474 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 OR2B3O76000 313 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 RSL1D1O76021 490 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 PDYNP01213 254 aa16.19■□□□□ 0.18
SCAMP4-211ENST00000588907 FOLR1P15328 257 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms