RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ZNF860A6NHJ4 632 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 A8MUI8 341 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 HNRNPRO43390 633 aaKnown RBP13.21□□□□□ -0.29
ATG4D-206ENST00000586863 LCMT2O60294 686 aaKnown RBP13.21□□□□□ -0.29
ATG4D-206ENST00000586863 BANF1O75531 89 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 WISP2O76076 250 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 C8GP07360 202 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 CYC1P08574 325 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 CDH1P12830 882 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 GABRB3P28472 473 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 TNFRSF8P28908 595 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 CDKN2DP55273 166 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 NAE1Q13564 534 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 PTK6Q13882 451 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 PHKG1Q16816 387 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 AGTRAPQ6RW13 159 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 PAQR3Q6TCH7 311 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 ANKRD37Q7Z713 158 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 ASPGQ86U10 573 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 SRRM1Q8IYB3 904 aaKnown RBP13.21□□□□□ -0.29
ATG4D-206ENST00000586863 BEST3Q8N1M1 668 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 CAMKVQ8NCB2 501 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 SUN3Q8TAQ9 357 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 MCOLN3Q8TDD5 553 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 ITLN2Q8WWU7 325 aaPredicted RBP13.21□□□□□ -0.29
ATG4D-206ENST00000586863 ALKBH8Q96BT7 664 aaKnown RBP13.21□□□□□ -0.29
ATG4D-206ENST00000586863 THAP11Q96EK4 314 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 PBKQ96KB5 322 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 NPAS2Q99743 824 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 SGPP1Q9BX95 441 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 STMN3Q9NZ72 180 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 SLC17A6Q9P2U8 582 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 COPG2Q9UBF2 871 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 C19orf25Q9UFG5 118 aaPredicted RBP13.21□□□□□ -0.29
ATG4D-206ENST00000586863 TEKT2Q9UIF3 430 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 CELSR1Q9NYQ6 3014 aa13.21□□□□□ -0.29
ATG4D-206ENST00000586863 TRGV8A0A0C4DH27 118 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 PGRMC1O00264 195 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 MAN1A2O60476 641 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 CDC123O75794 336 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 CRYABP02511 175 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 PGAM1P18669 254 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 RGS4P49798 205 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 ST13P50502 369 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 PGGT1BP53609 377 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 SP140Q13342 867 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 ZXDCQ2QGD7 858 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF766Q5HY98 468 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 LRRC8EQ6NSJ5 796 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 H3F3CQ6NXT2 135 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 PPIL6Q8IXY8 311 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 OR5T3Q8NGG3 340 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 DNAJB8Q8NHS0 232 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 TSLPQ969D9 159 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 LINGO1Q96FE5 620 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 CCDC120Q96HB5 630 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 UNKQ9C0B0 810 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 PARVBQ9HBI1 364 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 TRMT1Q9NXH9 659 aaKnown RBP13.2□□□□□ -0.3
ATG4D-206ENST00000586863 SEC14L3Q9UDX4 400 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 SH3BGRL2Q9UJC5 107 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 NAALAD2Q9Y3Q0 740 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
ATG4D-206ENST00000586863 TSPAN12O95859 305 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 CA7P43166 264 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 FNTAP49354 379 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 AGTR2P50052 363 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 MEF2AQ02078 507 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-206ENST00000586863 RHAGQ02094 409 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 TUBA3CQ13748 450 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 ACER2Q5QJU3 275 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 SP5Q6BEB4 398 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-206ENST00000586863 CAPN13Q6MZZ7 669 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-206ENST00000586863 UGT3A1Q6NUS8 523 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 TUBA3EQ6PEY2 450 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
ATG4D-206ENST00000586863 LCTLQ6UWM7 567 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 TMEM207Q6UWW9 146 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 PCGF5Q86SE9 256 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 CRLF3Q8IUI8 442 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 CNTN4Q8IWV2 1026 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 MYO1HQ8N1T3 1032 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 MFSD9Q8NBP5 474 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 MDS2Q8NDY4 140 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 PYCR2Q96C36 320 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 MOCOSQ96EN8 888 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 PEX11GQ96HA9 241 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 SIGLEC12Q96PQ1 595 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 HES7Q9BYE0 225 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 KCNK13Q9HB14 408 aa13.19□□□□□ -0.3
ATG4D-206ENST00000586863 LANCL2Q9NS86 450 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms