RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	CACNA1A	O00555	2505 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD36C	Q5JPF3	1778 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CHD9	Q3L8U1	2897 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754		A0A1W2PPW3	197 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SDR42E2	A6NKP2	422 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	YDJC	A8MPS7	323 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754		E9PI62	339 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SLC33A1	O00400	549 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PLOD2	O00469	737 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ARPC2	O15144	300 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PRKN	O60260	465 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SNX3	O60493	162 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	LMX1B	O60663	402 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	WISP2	O76076	250 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	GAS8-AS1	O95177	125 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PLG	P00747	810 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CRYAA	P02489	173 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	UMOD	P07911	640 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ZFY	P08048	801 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	HMOX1	P09601	288 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	HAPLN1	P10915	354 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ATP6V1B1	P15313	513 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PAX1	P15863	534 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CD22	P20273	847 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PTGER4	P35408	488 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	RGS7	P49802	495 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	MFAP3	P55082	362 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	STX1B	P61266	288 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TUBB4B	P68371	445 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	IRX6	P78412	446 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	YWHAH	Q04917	246 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	MBTD1	Q05BQ5	628 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SULT2A1	Q06520	285 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ARL16	Q0P5N6	197 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ILF3	Q12906	894 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	RBBP7	Q16576	425 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	MEP1B	Q16820	701 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD20A4	Q4UJ75	823 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD20A8P	Q5CZ79	823 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	NHSL2	Q5HYW2	709 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD20A2	Q5SQ80	823 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	STPG1	Q5TH74	334 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD20A1	Q5TYW2	823 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD20A3	Q5VUR7	823 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ZNF852	Q6ZMS4	543 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	MEX3B	Q6ZN04	569 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	DCUN1D3	Q8IWE4	304 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	NUP93	Q8N1F7	819 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	THAP8	Q8NA92	274 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	KBTBD3	Q8NAB2	608 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	NPEPL1	Q8NDH3	523 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CTCFL	Q8NI51	663 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	UBLCP1	Q8WVY7	318 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SEPT1	Q8WYJ6	367 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PROX1	Q92786	737 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	STAMBPL1	Q96FJ0	436 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	THOC1	Q96FV9	657 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	OTUB1	Q96FW1	271 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ZNF583	Q96ND8	569 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	RAD9A	Q99638	391 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CSTL1	Q9H114	145 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SNX25	Q9H3E2	840 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	IL1RAPL2	Q9NP60	686 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ZNF701	Q9NV72	531 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	OSER1	Q9NX31	292 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	LRWD1	Q9UFC0	647 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	DUOX1	Q9NRD9	1551 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	IL16	Q14005	1332 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	KIF7	Q2M1P5	1343 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CEMIP	Q8WUJ3	1361 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TRANK1	O15050	2925 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CHD7	Q9P2D1	2997 aa		3.36	□□□□□ -1.87
PPP4R1-229	ENST00000584754	PSME4	Q14997	1843 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ANKRD61	A6NGH8	418 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	C2orf81	A6NN90	581 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	FGF17	O60258	216 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	RLN1	P04808	185 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	IGHV4-38-2	P0DP08	117 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	EFNA1	P20827	205 aa	Predicted RBP	3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TLX1	P31314	330 aa	Predicted RBP	3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	WNT5A	P41221	380 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	IER3	P46695	156 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ZNF132	P52740	706 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	MAZ	P56270	477 aa	Known RBP	3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	CACNG1	Q06432	222 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TEF	Q10587	303 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SMU1	Q2TAY7	513 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	C2orf76	Q3KRA6	126 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	C1QTNF12	Q5T7M4	302 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	C20orf194	Q5TEA3	1177 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	TXNRD3NB	Q6F5E7	133 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SLC27A1	Q6PCB7	646 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	SHQ1	Q6PI26	577 aa	Known RBP	3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	RAPH1	Q70E73	1250 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	NUP54	Q7Z3B4	507 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	ARHGAP22	Q7Z5H3	698 aa		3.35	□□□□□ -1.87
PPP4R1-229	ENST00000584754	NRARP	Q7Z6K4	114 aa		3.35	□□□□□ -1.87

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