RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TIAF1O95411 115 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 MLYCDO95822 493 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ITGB2P05107 769 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 C1GALT1C1LP0DN25 315 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ZNF28P17035 718 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 SERPINB5P36952 375 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 CASP2P42575 452 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 CCR10P46092 362 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 GABRA4P48169 554 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 CCR8P51685 355 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 CCNG1P51959 295 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ITGA1P56199 1179 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 CSNK1G2P78368 415 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 LCP2Q13094 533 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 TRAF3Q13114 568 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 CHIT1Q13231 466 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 RCN2Q14257 317 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 TBCCQ15814 346 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 RBBP7Q16576 425 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ARHGAP40Q5TG30 622 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ATG9BQ674R7 924 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 FCRL6Q6DN72 434 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 FIGLAQ6QHK4 219 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 C6orf15Q6UXA7 325 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 PAQR7Q86WK9 346 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 TRIM42Q8IWZ5 723 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 DNAJC22Q8N4W6 341 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ESX1Q8N693 406 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 OR1L3Q8NH93 324 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 RAB3IL1Q8TBN0 382 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 DYDC1Q8WWB3 177 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 ATP6V1E2Q96A05 226 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 PRAP1Q96NZ9 151 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 PLCD4Q9BRC7 762 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 TRMOQ9BU70 441 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 EHD1Q9H4M9 534 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 PELI2Q9HAT8 420 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 SNX7Q9UNH6 387 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 PLCL2Q9UPR0 1127 aa15.28■□□□□ 0.04
CSNK1D-223ENST00000584472 COL6A6A6NMZ7 2263 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 OR2A25A4D2G3 310 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 UBFD1O14562 309 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 NRP2O60462 931 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 UGDHO60701 494 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 CPNE3O75131 537 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 SCRG1O75711 98 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 OTCP00480 354 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 SPTBP11277 2137 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 GRK2P25098 689 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 VARSP26640 1264 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ARRB2P32121 409 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 STAT5AP42229 794 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 IRF8Q02556 426 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ABHD18Q0P651 414 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 GALNT1Q10472 559 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 DOC2AQ14183 400 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 XKR6Q5GH73 641 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ZC3H12BQ5HYM0 836 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 MANEAQ5SRI9 462 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ATG14Q6ZNE5 492 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 TIPARPQ7Z3E1 657 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ADCK2Q7Z695 626 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 TMEM126BQ8IUX1 230 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 GPR135Q8IZ08 494 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 IL22RA1Q8N6P7 574 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 OR4F6Q8NGB9 312 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 AGAP11Q8TF27 550 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 N4BP2L2Q92802 583 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 PTCD3Q96EY7 689 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 CDK15Q96Q40 435 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ZNF382Q96SR6 550 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 MANSC1Q9H8J5 431 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ACTR8Q9H981 624 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 ZNF225Q9UK10 706 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 STK38LQ9Y2H1 464 aa15.27■□□□□ 0.04
CSNK1D-223ENST00000584472 TMEM114B3SHH9 223 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 H3BMH7 237 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 C1QL1O75973 258 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 OR2B3O76000 313 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 CLDN9O95484 217 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 CHRNGP07510 517 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 HBQ1P09105 142 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 CD22P20273 847 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 PKNOX1P55347 436 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 ABCE1P61221 599 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 REEP5Q00765 189 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 RELAQ04206 551 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 BST1Q10588 318 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 STX3Q13277 289 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 SLBPQ14493 270 aaKnown RBP eCLIP15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 ARL13AQ5H913 290 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 LIPJQ5W064 366 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 MILR1Q7Z6M3 343 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 SYVN1Q86TM6 617 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 L3MBTL4Q8NA19 623 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 GALNT6Q8NCL4 622 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 CKAP2Q8WWK9 683 aa15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 ZNF75CPQ92670 426 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-223ENST00000584472 KIAA1143Q96AT1 154 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms