RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 HTR7P34969 479 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ETV5P41161 510 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RAD23AP54725 363 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ERVFC1P60507 584 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AANATQ16613 207 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 Q6ZSR9 355 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KCTD20Q7Z5Y7 419 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SFRP1Q8N474 314 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TBC1D19Q8N5T2 526 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KRTCAP2Q8N6L1 136 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CNIH3Q8TBE1 160 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CHAC2Q8WUX2 184 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 EID2BQ96D98 161 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRMOQ9BU70 441 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 VAPAQ9P0L0 249 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SEPT3Q9UH03 358 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GSAPA4D1B5 854 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 B8ZZF3 427 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 H3BNC9 293 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PCDH17O14917 1159 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MITFO75030 526 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BCL10O95999 233 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 IGLV3-27P01718 113 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FGF1P05230 155 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 EFNA1P20827 205 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MAGP20916 626 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RCVRNP35243 200 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ARSFP54793 590 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ACVR1Q04771 509 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TM4SF20Q53R12 229 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DCDC5Q6ZRR9 648 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PRR23BQ6ZRT6 265 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SPRED1Q7Z699 444 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SACM1LQ9NTJ5 587 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HCFC1R1Q9NWW0 138 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AGO1Q9UL18 857 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BBIP1A8MTZ0 92 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GSTA4O15217 222 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HS6ST1O60243 411 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ADAM11O75078 769 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KRT75O95678 551 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NDST3O95803 873 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TSPAN12O95859 305 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 POU2F2P09086 479 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC2A4P14672 509 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HLA-DPA1P20036 260 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TLX1P31314 330 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PLA2G16P53816 162 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TAP2Q03519 686 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RAD51Q06609 339 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BNIP2Q12982 314 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AQP6Q13520 282 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RCAN2Q14206 197 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CTU2Q2VPK5 515 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PARP15Q460N3 678 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MANEAQ5SRI9 462 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PAPD4Q6PIY7 484 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DEGS2Q6QHC5 323 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MBOAT1Q6ZNC8 495 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GCNT7Q6ZNI0 430 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TMEM179BQ7Z7N9 219 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NUDT13Q86X67 352 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 C10orf111Q8N326 155 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CLDN19Q8N6F1 224 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ASB12Q8WXK4 309 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DUS3LQ96G46 650 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BOCQ9BWV1 1114 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TM6SF2Q9BZW4 377 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AIG1Q9NVV5 245 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TAS2R13Q9NYV9 303 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RUVBL1Q9Y265 456 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RAI2Q9Y5P3 530 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CPQQ9Y646 472 aa11.23□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRAV20A0A0B4J274 112 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 A8MU76 341 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 E5RI56 91 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CST1P01037 141 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 C8AP07357 584 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FGF4P08620 206 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZDHHC11BP0C7U3 371 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RPL38P63173 70 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZXDBP98169 803 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RELAQ04206 551 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF177Q13360 481 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DNASE1L3Q13609 305 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ABRAXAS2Q15018 415 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms