RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 RPS27LQ71UM5 84 aaKnown RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 VN1R4Q7Z5H5 301 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 SYVN1Q86TM6 617 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 CUZD1Q86UP6 607 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 MCATQ8IVS2 390 aaKnown RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 ARHGEF39Q8N4T4 335 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 ANKRD53Q8N9V6 530 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 CAMKVQ8NCB2 501 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 RCBTB1Q8NDN9 531 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 NT5CQ8TCD5 201 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 MGARPQ8TDB4 240 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 LRRC8CQ8TDW0 803 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF75CPQ92670 426 aaPredicted RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 USP7Q93009 1102 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 RERGQ96A58 199 aaPredicted RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 MVB12AQ96EY5 273 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 METTL2AQ96IZ6 378 aaKnown RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 C7orf26Q96N11 449 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 FRG2BQ96QU4 278 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 PAIP2Q9BPZ3 127 aaKnown RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 NLNQ9BYT8 704 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 NRSN2Q9GZP1 204 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 SPNS1Q9H2V7 528 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 MLXIPLQ9NP71 852 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 MID1IP1Q9NPA3 183 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 ABCF3Q9NUQ8 709 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 SERTAD3Q9UJW9 196 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF490Q9ULM2 529 aaPredicted RBP9.94□□□□□ -0.82
CCDC47-203ENST00000580986 SRPK3Q9UPE1 567 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 WASF3Q9UPY6 502 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 RNF11Q9Y3C5 154 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 RAP2CQ9Y3L5 183 aa9.94□□□□□ -0.82
CCDC47-203ENST00000580986 A0A1B0GTL3 188 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 WDR91A4D1P6 747 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 URADA6NGE7 173 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ANKDD1BA6NHY2 528 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 A8MU76 341 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SLCO1B7G3V0H7 640 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 PPP6CO00743 305 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 OR1F1O43749 312 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 LCMT2O60294 686 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 NRP2O60462 931 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 OR4F21O95013 312 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SEMA3DO95025 777 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 HSPA4LO95757 839 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CAPN1P07384 714 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CHRNGP07510 517 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ARRB2P32121 409 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 TSFMP43897 325 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ITGA1P56199 1179 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 RGS1Q08116 209 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CSTF3Q12996 717 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 IFT88Q13099 833 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 TARDBPQ13148 414 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CUL3Q13618 768 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 FAM53BQ14153 422 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 GRM7Q14831 915 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ZRSR2Q15696 482 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CPSF6Q16630 551 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 PRTGQ2VWP7 1150 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 FAM214AQ32MH5 1076 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CES4AQ5XG92 561 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 KANK2Q63ZY3 851 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 FRMPD2BQ6IN97 320 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CEACAM20Q6UY09 585 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 TRIM46Q7Z4K8 759 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ASPGQ86U10 573 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 PPP1R3BQ86XI6 285 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 GPR135Q8IZ08 494 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CLYBLQ8N0X4 340 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 AFAP1L2Q8N4X5 818 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 GBP7Q8N8V2 638 aaPredicted RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF740Q8NDX6 193 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SRFBP1Q8NEF9 429 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 METTL6Q8TCB7 284 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CREB3L4Q8TEY5 395 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF473Q8WTR7 871 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 N4BP2L2Q92802 583 aaPredicted RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF775Q96BV0 537 aaPredicted RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 FAR2Q96K12 515 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SORT1Q99523 831 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SLC6A16Q9GZN6 736 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ILKAPQ9H0C8 392 aaPredicted RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 CLK4Q9HAZ1 481 aaKnown RBP9.93□□□□□ -0.82
CCDC47-203ENST00000580986 PFDN4Q9NQP4 134 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 ACSL6Q9UKU0 697 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 RARRES3Q9UL19 164 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 KLHL20Q9Y2M5 609 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 LOXL2Q9Y4K0 774 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 SLC22A7Q9Y694 548 aa9.93□□□□□ -0.82
CCDC47-203ENST00000580986 A0A0J9YVX5 310 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 FEZF1A0PJY2 475 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 EFCAB7A8K855 629 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 TMEM150CB9EJG8 249 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 H0YGG7 62 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 AZIN1O14977 448 aa9.92□□□□□ -0.82
CCDC47-203ENST00000580986 POLR1CO15160 346 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms