RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 CLK3P49761 638 aaKnown RBP16.9■□□□□ 0.3
ERBB2-205ENST00000578199 PLA2G16P53816 162 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 CDK5R2Q13319 367 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 LAIR1Q6GTX8 287 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 PIK3C3Q8NEB9 887 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 WDR48Q8TAF3 677 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 UBE2FQ969M7 185 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 OTUB2Q96DC9 234 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 LRIG1Q96JA1 1093 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 TMEM98Q9Y2Y6 226 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 TRANK1O15050 2925 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 OPN1SWP03999 348 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 C6P13671 934 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 RAD23AP54725 363 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 RGNQ15493 299 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 COX20Q5RI15 118 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 C9orf64Q5T6V5 341 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 CBLL1Q75N03 491 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 ARMCX6Q7L4S7 300 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 TRIM73Q86UV7 250 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 CACUL1Q86Y37 369 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 NPAS3Q8IXF0 933 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 SYNPOQ8N3V7 929 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 OR4A15Q8NGL6 344 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 TANKQ92844 425 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 CIDECQ96AQ7 238 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-205ENST00000578199 HSPBAP1Q96EW2 488 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 RHNO1Q9BSD3 238 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 DGKBQ9Y6T7 804 aa16.9■□□□□ 0.3
ERBB2-205ENST00000578199 LZTS3O60299 673 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 SEMG1P04279 462 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 ZNF8P17098 575 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 TIA1P31483 386 aaKnown RBP eCLIP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 CAPN13Q6MZZ7 669 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 TMC5Q6UXY8 1006 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 HORMAD1Q86X24 394 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 ZFP90Q8TF47 636 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 NUS1Q96E22 293 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 TUBA1CQ9BQE3 449 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 ACAT2Q9BWD1 397 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 PREBQ9HCU5 417 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 TM9SF3Q9HD45 589 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 GPATCH2Q9NW75 528 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 WARS2Q9UGM6 360 aaKnown RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 RPS6KA6Q9UK32 745 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 BAG5Q9UL15 447 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 CDH7Q9ULB5 785 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 SAMHD1Q9Y3Z3 626 aaKnown RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 SLC16A6O15403 523 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 POP7O75817 140 aaKnown RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 INMTO95050 263 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 JUNBP17275 347 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 GSTM2P28161 218 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 CRATP43155 626 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 HBA1P69905 142 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 ANKDD1AQ495B1 522 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 CYP27C1Q4G0S4 372 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 FAM83HQ6ZRV2 1179 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 EIF3MQ7L2H7 374 aaKnown RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 COMMD6Q7Z4G1 85 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 NRSN1Q8IZ57 195 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 CELF5Q8N6W0 485 aaKnown RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 PLA2G15Q8NCC3 412 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 SORBS1Q9BX66 1292 aaKnown RBP16.89■□□□□ 0.29
ERBB2-205ENST00000578199 ACSL6Q9UKU0 697 aa16.89■□□□□ 0.29
ERBB2-205ENST00000578199 SLC9A3R1O14745 358 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 GCM2O75603 506 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 ARHGDIAP52565 204 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 TAP2Q03519 686 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 ZNF33BQ06732 778 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 FOXD4Q12950 439 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 SMN1Q16637 294 aaKnown RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 PRSS53Q2L4Q9 553 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 GTF2IRD2BQ6EKJ0 949 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 DHRS4L2Q6PKH6 230 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 GTF2IRD2Q86UP8 949 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 MMP21Q8N119 569 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 OR5AK3PQ8NH89 298 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 CHST8Q9H2A9 424 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 FAF1Q9UNN5 650 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 ZBTB11O95625 1053 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 PRNPP04156 253 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 ETFAP13804 333 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 HSD3B1P14060 373 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 HSD3B2P26439 372 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 HOXA9P31269 272 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 GRSF1Q12849 480 aaKnown RBP eCLIP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 NFATC3Q12968 1075 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 SPIN4Q56A73 249 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 KDM4DQ6B0I6 523 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 MMAAQ8IVH4 418 aaKnown RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 VPS37AQ8NEZ2 397 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 COQ8BQ96D53 544 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 ZNF451Q9Y4E5 1061 aa16.88■□□□□ 0.29
ERBB2-205ENST00000578199 CFAP20Q9Y6A4 193 aaKnown RBP16.88■□□□□ 0.29
ERBB2-205ENST00000578199 A0A0J9YVX5 310 aa16.87■□□□□ 0.29
ERBB2-205ENST00000578199 PIPSLA2A3N6 862 aa16.87■□□□□ 0.29
ERBB2-205ENST00000578199 LINC01553A4QN01 128 aa16.87■□□□□ 0.29
ERBB2-205ENST00000578199 HEPACAM2A8MVW5 462 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms