RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 WDR20Q8TBZ3 569 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DYDC1Q8WWB3 177 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 STON2Q8WXE9 905 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 UBE2E3Q969T4 207 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TCTN2Q96GX1 697 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZNF285Q96NJ3 590 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CCT7Q99832 543 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DPH7Q9BTV6 452 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SLC29A3Q9BZD2 475 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZNF768Q9H5H4 540 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SEMA4BQ9NPR2 832 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GEMIN8Q9NWZ8 242 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ADGRE2Q9UHX3 823 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZDHHC2Q9UIJ5 367 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ADAM21Q9UKJ8 722 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SH2B3Q9UQQ2 575 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PCDHGA11Q9Y5H2 935 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 UNC13CQ8NB66 2214 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HEATR5BQ9P2D3 2071 aa10.67□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TRBC2A0A5B9 178 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GSAPA4D1B5 854 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SLCO1B7G3V0H7 640 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 H7BY64 318 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 FOXE1O00358 373 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SRPX2O60687 465 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 EDF1O60869 148 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SHOX2O60902 331 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RFPL3O75679 317 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DXOO77932 396 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZBTB11O95625 1053 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RPLP0P05388 317 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 THRAP10827 490 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NEFHP12036 1026 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CDH1P12830 882 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HGFP14210 728 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SERPINB1P30740 379 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CCKBRP32239 447 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AHRP35869 848 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RPL14P50914 215 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PPP1CAP62136 330 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 REEP5Q00765 189 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZIC1Q15915 447 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CCDC157Q569K6 752 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 XKR6Q5GH73 641 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 USP53Q70EK8 1073 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RNF44Q7L0R7 432 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TMPRSS9Q7Z410 1059 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TRIM46Q7Z4K8 759 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 KRT78Q8N1N4 520 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 D2HGDHQ8N465 521 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DNAJC22Q8N4W6 341 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SNX31Q8N9S9 440 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TTLQ8NG68 377 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 USP7Q93009 1102 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ATP6V1E2Q96A05 226 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TM4SF19Q96DZ7 209 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PRAP1Q96NZ9 151 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OR2A5Q96R48 311 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MAP3K3Q99759 626 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AIF1LQ9BQI0 150 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NUDT22Q9BRQ3 303 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ACAT2Q9BWD1 397 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ACTR8Q9H981 624 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TNFRSF12AQ9NP84 129 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MID1IP1Q9NPA3 183 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CUEDC1Q9NWM3 386 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RNF11Q9Y3C5 154 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TRAF6Q9Y4K3 522 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CACNA1DQ01668 2161 aa10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 COL27A1Q8IZC6 1860 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-204ENST00000577664 IGHV5-51A0A0C4DH38 117 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 IGHV5-10-1A0A0J9YXX1 117 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 D6RAR5 112 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 H3BMH7 237 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TMX2-CTNND1H3BSU7 103 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZNF195O14628 629 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HGSO14964 777 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AZIN1O14977 448 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LCMT2O60294 686 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OR4F21O95013 312 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HSD3B1P14060 373 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ST6GAL1P15907 406 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ALOX15P16050 662 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NELFEP18615 380 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MAGP20916 626 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HSD3B2P26439 372 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LSP1P33241 339 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GRK3P35626 688 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PIK3CBP42338 1070 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SCTRP47872 440 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ARFIP1P53367 373 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GFERP55789 205 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RPS15AP62244 130 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HSD11B2P80365 405 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HIST2H2ACQ16777 129 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AMZ1Q400G9 498 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZC3H12BQ5HYM0 836 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms