RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 METTL27Q8N6F8 245 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 AMER2Q8N7J2 671 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 SPC24Q8NBT2 197 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 OR4L1Q8NH43 312 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 INPP5DQ92835 1189 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 FBXW5Q969U6 566 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.96□□□□□ -1.46
NUP88-212ENST00000576708 PNPLA2Q96AD5 504 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 SNRNP40Q96DI7 357 aaKnown RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 SCYL1Q96KG9 808 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 RANBP9Q96S59 729 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 MENTQ9BUN1 341 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 CNTD2Q9H8S5 307 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 CHRAC1Q9NRG0 131 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 TXLNGQ9NUQ3 528 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 ASF1BQ9NVP2 202 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 EURLQ9NYK6 297 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 OR6C2Q9NZP2 312 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 STOX2Q9P2F5 926 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 POLG2Q9UHN1 485 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 FBXO9Q9UK97 447 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 CBLCQ9ULV8 474 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 PLCL2Q9UPR0 1127 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 ZNF148Q9UQR1 794 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 NTNG1Q9Y2I2 539 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 PADI2Q9Y2J8 665 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 CSAG2Q9Y5P2 127 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 NFS1Q9Y697 457 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 AP1M2Q9Y6Q5 423 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 NBASA2RRP1 2371 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 HEATR9A2RTY3 570 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 E7EVH7 732 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 PEX12O00623 359 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 GPC4O75487 556 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 NAT1P18440 290 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 KRT15P19012 456 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CD9P21926 228 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 ADRA1DP25100 572 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 HSD3B2P26439 372 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 AOAHP28039 575 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 PSMB5P28074 263 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 NMBRP28336 390 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 FDFT1P37268 417 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 OR1D4P47884 311 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 RAB28P51157 221 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 RRADP55042 308 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 PRAMEP78395 509 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 ACVR1Q04771 509 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 MYBPC3Q14896 1274 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 SIX1Q15475 284 aaPredicted RBP5.95□□□□□ -1.46
NUP88-212ENST00000576708 FASTKD1Q53R41 847 aaKnown RBP5.95□□□□□ -1.46
NUP88-212ENST00000576708 DNAJC21Q5F1R6 531 aaKnown RBP5.95□□□□□ -1.46
NUP88-212ENST00000576708 VWA5B1Q5TIE3 1220 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 LYPLAL1Q5VWZ2 237 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 FIGLAQ6QHK4 219 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CES3Q6UWW8 571 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 COX15Q7KZN9 410 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 LINC00523Q86TU6 105 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CUZD1Q86UP6 607 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 SLC13A5Q86YT5 568 aaPredicted RBP5.95□□□□□ -1.46
NUP88-212ENST00000576708 SLC22A15Q8IZD6 547 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 SYCE1Q8N0S2 351 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 GALNT16Q8N428 558 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 OR2Y1Q8NGV0 311 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 PROKR1Q8TCW9 393 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 SSC4DQ8WTU2 575 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 PTERQ96BW5 349 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 FAM136AQ96C01 138 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 FER1L6-AS2Q96M78 137 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 NDC1Q9BTX1 674 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CARD6Q9BX69 1037 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CHRNA10Q9GZZ6 450 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 SLC6A20Q9NP91 592 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.95□□□□□ -1.46
NUP88-212ENST00000576708 CTSFQ9UBX1 484 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 FBXL4Q9UKA2 621 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 TCAF1Q9Y4C2 921 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 SHANK1Q9Y566 2161 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 MAU2Q9Y6X3 613 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 FER1L5A0AVI2 2057 aa5.95□□□□□ -1.46
NUP88-212ENST00000576708 CCDC88CQ9P219 2028 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 LOC105369274A0A096LPK9 316 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 LOC102723532A0A0G2JNH3 316 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 TCRBV7S3A2A0A539 114 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 GOLGA8KD6RF30 607 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 GOLGA8TH3BQL2 631 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 ETV2O00321 342 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 QSOX1O00391 747 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 SOCS6O14544 535 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 RASGRF2O14827 1237 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 FFAR3O14843 346 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CD3EAPO15446 510 aaKnown RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 GPR42O15529 346 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 PRICKLE3O43900 615 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 CTSVO60911 334 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 ZNF189O75820 626 aaPredicted RBP5.94□□□□□ -1.46
NUP88-212ENST00000576708 SLCO2B1O94956 709 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CBX6O95503 412 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 CLDN1O95832 211 aa5.94□□□□□ -1.46
NUP88-212ENST00000576708 GAS8O95995 478 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms