RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LGALS13Q9UHV8 139 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 TLK1Q9UKI8 766 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 CCDC88CQ9P219 2028 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 A0A087X1B8 175 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 HMX2A2RU54 273 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-216ENST00000575599 FFAR3O14843 346 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 GPR42O15529 346 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 OR1F1O43749 312 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 LCMT2O60294 686 aaKnown RBP12.61□□□□□ -0.39
RPAIN-216ENST00000575599 RFPL1O75677 317 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 LTA4HP09960 611 aaKnown RBP12.61□□□□□ -0.39
RPAIN-216ENST00000575599 TFEBP19484 476 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 SERPINB8P50452 374 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ATP1A4Q13733 1029 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 NKG7Q16617 165 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 NDUFA9Q16795 377 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 GARNL3Q5VVW2 1013 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 OVCH1Q7RTY7 1134 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ASPGQ86U10 573 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ZNF843Q8N446 348 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ABHD11Q8NFV4 315 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ZCCHC10Q8TBK6 192 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 KCTD4Q8WVF5 259 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 KIAA1191Q96A73 305 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 NXNL1Q96CM4 212 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 MMABQ96EY8 250 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 SH3GL2Q99962 352 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 TMEM79Q9BSE2 394 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 YIPF2Q9BWQ6 316 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 TRIM55Q9BYV6 548 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 DRC3Q9H069 523 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ADNPQ9H2P0 1102 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 SPNS1Q9H2V7 528 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 NMRAL1Q9HBL8 299 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ACSS2Q9NR19 701 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 SENP1Q9P0U3 644 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 ACOT9Q9Y305 439 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
RPAIN-216ENST00000575599 KCNE2Q9Y6J6 123 aa12.61□□□□□ -0.39
RPAIN-216ENST00000575599 KCNE1BA0A087WTH5 132 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 A0A096LPK6 155 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 A0A0A6YYC8 382 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SUPT3HB4E1H0 165 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 I3L1I5 382 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 NDUFS4O43181 175 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SUPT3HO75486 399 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ONECUT2O95948 504 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ALBP02768 609 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ALDOAP04075 364 aaKnown RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SERPIND1P05546 499 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 C2P06681 752 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 UMODP07911 640 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SLC35G6P0C7Q6 338 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SFTPCP11686 197 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 TYK2P29597 1187 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SLC6A12P48065 614 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 GLRBP48167 497 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 HSPA7P48741 367 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 OCA2Q04671 838 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SSPNQ14714 243 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SULT1C3Q6IMI6 304 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 MRGPREQ86SM8 312 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 PRSS58Q8IYP2 241 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 TCAIMQ8N3R3 496 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 TBC1D19Q8N5T2 526 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 MFSD9Q8NBP5 474 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 CAMKVQ8NCB2 501 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 C9orf43Q8TAL5 461 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 STAG3L4Q8TBR4 150 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SLC13A3Q8WWT9 602 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ESAMQ96AP7 390 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 MVB12AQ96EY5 273 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SMC6Q96SB8 1091 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 SPSB2Q99619 263 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ING2Q9H160 280 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 VPS11Q9H270 941 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 WDR54Q9H977 334 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 CNOT10Q9H9A5 744 aaKnown RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 PELI2Q9HAT8 420 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ZNF71Q9NQZ8 489 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ZNF282Q9UDV7 671 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-216ENST00000575599 CDC14AQ9UNH5 594 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 ATRXP46100 2492 aa12.6□□□□□ -0.39
RPAIN-216ENST00000575599 TRBC2A0A5B9 178 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 MKRN2OSH3BPM6 223 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 UBXN8O00124 270 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 PEX12O00623 359 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 TAPBPO15533 448 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 PRPF4O43172 522 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 FOXS1O43638 330 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 KERAO60938 352 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 IL1RNP18510 177 aa12.59□□□□□ -0.39
RPAIN-216ENST00000575599 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
RPAIN-216ENST00000575599 KCNC1P48547 511 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms