RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ASCL3Q9NQ33 180 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 FOXJ2Q9P0K8 574 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 SRPK3Q9UPE1 567 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 RNF11Q9Y3C5 154 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 PCDHB3Q9Y5E6 796 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 PCDHGA11Q9Y5H2 935 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 DCHS1Q96JQ0 3298 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 ACACAQ13085 2346 aa13.86□□□□□ -0.19
NPLOC4-218ENST00000574964 HYKKA2RU49 373 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 CDRT15L2A8MXV6 281 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 BIRC5O15392 142 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 NDUFS4O43181 175 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 CPNE3O75131 537 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 STK17BO94768 372 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 TIAF1O95411 115 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 KLK3P07288 261 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 CTSBP07858 339 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 CD22P20273 847 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 GSTM2P28161 218 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 HMOX2P30519 316 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 SLC18A1P54219 525 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 PKNOX1P55347 436 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 TRAF3Q13114 568 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 DDX39BQ13838 428 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 MUM1Q2TAK8 710 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 HKDC1Q2TB90 917 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 TBC1D25Q3MII6 688 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 PRAMEF17Q5VTA0 474 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 TTLL10Q6ZVT0 673 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 VN1R4Q7Z5H5 301 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 L3MBTL4Q8NA19 623 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 CNDP1Q96KN2 507 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 ZNF285Q96NJ3 590 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 ZNF382Q96SR6 550 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 CUTCQ9NTM9 273 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 RUVBL1Q9Y265 456 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 NCOR2Q9Y618 2525 aa13.85□□□□□ -0.19
NPLOC4-218ENST00000574964 URADA6NGE7 173 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 STMND1H3BQB6 276 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 H3BQF6 201 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 PPP6CO00743 305 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 FFAR3O14843 346 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 GPR42O15529 346 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 NPHS1O60500 1241 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 OR4F21O95013 312 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 CCNYL3P0C7X3 344 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 DHRS4L1P0CG22 281 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ZNF28P17035 718 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 PPP2R2AP63151 447 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 IFT88Q13099 833 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 PWP1Q13610 501 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 E2F2Q14209 437 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 CHI3L2Q15782 390 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 C6orf15Q6UXA7 325 aaPredicted RBP13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ZCCHC23Q6ZST2 131 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 FRMD7Q6ZUT3 714 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ANKRD53Q8N9V6 530 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 GALNT6Q8NCL4 622 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 OR7G3Q8NG95 312 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ZCCHC10Q8TBK6 192 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 SEC16BQ96JE7 1060 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 MACROD1Q9BQ69 325 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 TRMOQ9BU70 441 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ELOVL6Q9H5J4 265 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 SYNPO2LQ9H987 977 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 EML4Q9HC35 981 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 TRPS1Q9UHF7 1281 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ADGRE2Q9UHX3 823 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 ZNF490Q9ULM2 529 aaPredicted RBP13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 SNX6Q9UNH7 406 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 URB1O60287 2271 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 SPEGQ15772 3267 aa13.84□□□□□ -0.19
NPLOC4-218ENST00000574964 FITM1A5D6W6 292 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 H0YIV9 168 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 P2RX6O15547 441 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 CLEC3AO75596 197 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 ENO1P06733 434 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 AGXTP21549 392 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 SERPINB1P30740 379 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 SERPINB5P36952 375 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 WDR4P57081 412 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 PCBP4P57723 403 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 STXBP1P61764 594 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 COL9A2Q14055 689 aaPredicted RBP13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 PRTGQ2VWP7 1150 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 GGTA1PQ4G0N0 100 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 SGO1Q5FBB7 561 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 TOR1AIP1Q5JTV8 583 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 MANEAQ5SRI9 462 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 C1orf189Q5VU69 101 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 GARNL3Q5VVW2 1013 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 SYVN1Q86TM6 617 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 TRIM42Q8IWZ5 723 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 LAS2Q8IYD9 372 aa13.83□□□□□ -0.2
NPLOC4-218ENST00000574964 NLGN4XQ8N0W4 816 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms