RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ZNF583Q96ND8 569 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 ZNF184Q99676 751 aaPredicted RBP27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 OR51B5Q9H339 312 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 GPR27Q9NS67 375 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 ARMC1Q9NVT9 282 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 C2orf42Q9NWW7 574 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 PCDHB14Q9Y5E9 798 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 CROCCQ5TZA2 2017 aa27.28■■□□□ 1.96
CTDNEP1-210ENST00000574322 A6NCN8 305 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 ATP6V1C1P21283 382 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 CD6P30203 668 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 ABATP80404 500 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 KBTBD2Q8IY47 623 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 LILRA2Q8N149 483 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 GPR156Q8NFN8 814 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 TSTD1Q8NFU3 115 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 OR7A2PQ8NGA2 310 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 COQ8BQ96D53 544 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 CCDC115Q96NT0 180 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 REXO4Q9GZR2 422 aaKnown RBP27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 CCM2LQ9NUG4 571 aaPredicted RBP27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 AKAP10O43572 662 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 ZNF217O75362 1048 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 TBX6O95947 436 aaPredicted RBP27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 COX7A2P14406 83 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 PLIN5Q00G26 463 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 CYP4F3Q08477 520 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 ZNF763Q0D2J5 394 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 OR4F3Q6IEY1 312 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 IFNEQ86WN2 208 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 TMEM132CQ8N3T6 1108 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 TMEM105Q8N8V8 129 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 GFM2Q969S9 779 aaKnown RBP27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 BIRC7Q96CA5 298 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 NAF1Q96HR8 494 aaKnown RBP27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 EFHD1Q9BUP0 239 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 TMEM168Q9H0V1 697 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 XKR8Q9H6D3 395 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 ATP6V1HQ9UI12 483 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 MCM8Q9UJA3 840 aa27.27■■□□□ 1.96
CTDNEP1-210ENST00000574322 ANKDD1BA6NHY2 528 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 H7BY64 318 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 AK4P27144 223 aaPredicted RBP27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 CSNK1G2P78368 415 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 RBBP5Q15291 538 aaKnown RBP27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 SF1Q15637 639 aaKnown RBP27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 DUOXA1Q1HG43 343 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 TMEM102Q8N9M5 508 aaPredicted RBP27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 ANKRD53Q8N9V6 530 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 NELL1Q92832 810 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZNF570Q96NI8 536 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 PRAP1Q96NZ9 151 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 ECSITQ9BQ95 431 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 CPPED1Q9BRF8 314 aaPredicted RBP27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 MS4A8Q9BY19 250 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 KLHL4Q9C0H6 718 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 TWSG1Q9GZX9 223 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 AHSPQ9NZD4 102 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 MAGEL2Q9UJ55 1249 aa27.26■■□□□ 1.95
CTDNEP1-210ENST00000574322 GABRR3A8MPY1 467 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 SH3BGRLO75368 114 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 EML2O95834 649 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 HPCAL1P37235 193 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR4D2P58180 307 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 TRIP10Q15642 601 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 DEPDC1Q5TB30 811 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 RD3Q7Z3Z2 195 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 SPPL2CQ8IUH8 684 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR13H1Q8NG92 308 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 FAM174AQ8TBP5 190 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 PRPF18Q99633 342 aaKnown RBP27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 INPP5KQ9BT40 448 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 COPS7BQ9H9Q2 264 aaPredicted RBP27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 MYNNQ9NPC7 610 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 C11orf16Q9NQ32 467 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 SLC6A13Q9NSD5 602 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 OR6C2Q9NZP2 312 aa27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.25■■□□□ 1.95
CTDNEP1-210ENST00000574322 IGKV1-8A0A0C4DH67 115 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 GNG14A0A1W2PPG7 69 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 TCRBV5S2A0A599 114 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 SCAMP1O15126 338 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 KLHL18O94889 574 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 GPIP06744 558 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 UMPSP11172 480 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 PEX2P28328 305 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 SHMT2P34897 504 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 CXCL12P48061 93 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 LRRC74AQ0VAA2 488 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 TLDC1Q6P9B6 456 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 SLC9B2Q86UD5 537 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 NRROSQ86YC3 692 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 TNIP2Q8NFZ5 429 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 CANT1Q8WVQ1 401 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 GBP5Q96PP8 586 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 PKP2Q99959 881 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 IKZF5Q9H5V7 419 aa27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 KAT8Q9H7Z6 458 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-210ENST00000574322 ZNF624Q9P2J8 865 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms