RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ADGRF3Q8IZF5 1079 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 TMEM151AQ8N4L1 468 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 C19orf47Q8N9M1 422 aaKnown RBP11.35□□□□□ -0.59
NDE1-206ENST00000572967 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 SLC38A9Q8NBW4 561 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 OR1L3Q8NH93 324 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 ATP6V1E2Q96A05 226 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 CLIP3Q96DZ5 547 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 CNDP1Q96KN2 507 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 SGPP1Q9BX95 441 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 TRIM55Q9BYV6 548 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 CHST8Q9H2A9 424 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 C1GALT1Q9NS00 363 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 ANKMY1Q9P2S6 941 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 CIDEBQ9UHD4 219 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 SPTBP11277 2137 aa11.35□□□□□ -0.59
NDE1-206ENST00000572967 BSNQ9UPA5 3926 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 ISM1B1AKI9 464 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 K7EM74 188 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 KLF11O14901 512 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 UGDHO60701 494 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 CRCPO75575 148 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 SBK3P0C264 359 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 UGT2B7P16662 529 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 CXCR2P25025 360 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PTPN4P29074 926 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 GRK3P35626 688 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 ARL1P40616 181 aaPredicted RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 KCNC1P48547 511 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 NAGLUP54802 743 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PKNOX1P55347 436 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 WDR4P57081 412 aaKnown RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 KCNC4Q03721 635 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 GALNT1Q10472 559 aaPredicted RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 GTF2H2Q13888 395 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 MPP2Q14168 576 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 RCN2Q14257 317 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 GRB7Q14451 532 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 CHI3L2Q15782 390 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 CCSMST1Q4G0I0 132 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 ZNF678Q5SXM1 525 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 C10orf62Q5T681 223 aaPredicted RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 GTF2H2CQ6P1K8 395 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 MBOAT1Q6ZNC8 495 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 THOC6Q86W42 341 aaKnown RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 BPHLQ86WA6 291 aaPredicted RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 TEX9Q8N6V9 391 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 ENDOVQ8N8Q3 282 aaKnown RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 OR8K5Q8NH50 307 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 UBE2E3Q969T4 207 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 IL17FQ96PD4 163 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 FCRL4Q96PJ5 515 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 TRAPPC9Q96Q05 1148 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 TMEM237Q96Q45 408 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 TMEM79Q9BSE2 394 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PITPNM3Q9BZ71 974 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 SLC7A5P2Q9GIP4 190 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PITHD1Q9GZP4 211 aaPredicted RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 ATG10Q9H0Y0 220 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 EHD1Q9H4M9 534 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
NDE1-206ENST00000572967 MLXIPLQ9NP71 852 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PFDN4Q9NQP4 134 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 SPHK1Q9NYA1 384 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PCTPQ9UKL6 214 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 SNX7Q9UNH6 387 aa11.34□□□□□ -0.59
NDE1-206ENST00000572967 PIEZO2Q9H5I5 2752 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 WDR91A4D1P6 747 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 MKRN2OSH3BPM6 223 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 HSPA4LO95757 839 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 CHEK2O96017 543 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 CCNG1P51959 295 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 ITGA1P56199 1179 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 RPS15P62841 145 aaKnown RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 CLCQ05315 142 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 STX3Q13277 289 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 LAPTM5Q13571 262 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 SF1Q15637 639 aaKnown RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 RBBP7Q16576 425 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 HIST2H2ACQ16777 129 aaPredicted RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 UGT8Q16880 541 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 SLC5A12Q1EHB4 618 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 HIST2H2AA3Q6FI13 130 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 FRMD7Q6ZUT3 714 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 SYVN1Q86TM6 617 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 FAM20CQ8IXL6 584 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 ZNF483Q8TF39 744 aaPredicted RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 SLC5A11Q8WWX8 675 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 N4BP2L2Q92802 583 aaPredicted RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 REPS1Q96D71 796 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 MAGEB18Q96M61 343 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 ZNF382Q96SR6 550 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 MENTQ9BUN1 341 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 EFCAB11Q9BUY7 163 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 C12orf65Q9H3J6 166 aaKnown RBP11.33□□□□□ -0.6
NDE1-206ENST00000572967 MANSC1Q9H8J5 431 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 ACTR8Q9H981 624 aa11.33□□□□□ -0.6
NDE1-206ENST00000572967 PELI2Q9HAT8 420 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms