RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 BCL6P41182 706 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 TAS2R50P59544 299 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 ABATP80404 500 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 ACTN3Q08043 901 aaPredicted RBP18.66■□□□□ 0.58
CCDC40-206ENST00000572083 USP10Q14694 798 aaKnown RBP18.66■□□□□ 0.58
CCDC40-206ENST00000572083 OASLQ15646 514 aaKnown RBP18.66■□□□□ 0.58
CCDC40-206ENST00000572083 NSDHLQ15738 373 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 PEX26Q7Z412 305 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 SPNS2Q8IVW8 549 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 KIF2BQ8N4N8 673 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 LPAR4Q99677 370 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 TMUB1Q9BVT8 246 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 CRYL1Q9Y2S2 319 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 HCFC1P51610 2035 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 SCN3AQ9NY46 2000 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 TPP2P29144 1249 aaPredicted RBP18.65■□□□□ 0.58
CCDC40-206ENST00000572083 STIP1P31948 543 aaKnown RBP18.65■□□□□ 0.58
CCDC40-206ENST00000572083 HSD17B2P37059 387 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 RFC3P40938 356 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 SLC26A5P58743 744 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 RHAGQ02094 409 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 TFF3Q07654 80 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 TMEM214Q6NUQ4 689 aaKnown RBP18.65■□□□□ 0.58
CCDC40-206ENST00000572083 CES3Q6UWW8 571 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 PDSS2Q86YH6 399 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 FAM57AQ8TBR7 257 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 OLFM1Q99784 485 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 EBNA1BP2Q99848 306 aaKnown RBP18.65■□□□□ 0.58
CCDC40-206ENST00000572083 UCK2Q9BZX2 261 aa18.65■□□□□ 0.58
CCDC40-206ENST00000572083 REXO2Q9Y3B8 237 aaKnown RBP18.65■□□□□ 0.58
CCDC40-206ENST00000572083 ANKHD1Q8IWZ3 2542 aaKnown RBP18.65■□□□□ 0.58
CCDC40-206ENST00000572083 A0A1B0GTH9 108 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 ZNF860A6NHJ4 632 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 E5RI56 91 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 TFECO14948 347 aaPredicted RBP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 LIASO43766 372 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 CDC40O60508 579 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 VAPBO95292 243 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 FTCDO95954 541 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 DNAJA1P31689 397 aaKnown RBP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 PTGS2P35354 604 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 OR4D2P58180 307 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 TYSND1Q2T9J0 566 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 RPS19BP1Q86WX3 136 aaKnown RBP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 ZNF227Q86WZ6 799 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 REXO1L1PQ8IX06 675 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 LRRC56Q8IYG6 542 aaPredicted RBP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 MMP21Q8N119 569 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 PEX11GQ96HA9 241 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 CCDC138Q96M89 665 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 ZNF559Q9BR84 538 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 ANKHQ9HCJ1 492 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 ZNF148Q9UQR1 794 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 RNF6Q9Y252 685 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 HRH3Q9Y5N1 445 aa18.64■□□□□ 0.57
CCDC40-206ENST00000572083 EPN1Q9Y6I3 576 aaPredicted RBP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 INTS1Q8N201 2190 aaKnown RBP18.64■□□□□ 0.57
CCDC40-206ENST00000572083 BTNL10A8MVZ5 291 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 FOXO6A8MYZ6 492 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 H3BMM5 538 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 ESR1P03372 595 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 MSX1P28360 303 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 CYB561P49447 251 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 MEOX1P50221 254 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 ITGA8P53708 1063 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 RPS15AP62244 130 aaKnown RBP18.63■□□□□ 0.57
CCDC40-206ENST00000572083 RNF187Q5TA31 235 aaPredicted RBP18.63■□□□□ 0.57
CCDC40-206ENST00000572083 MRNIPQ6NTE8 343 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 SDCCAG8Q86SQ7 713 aaPredicted RBP18.63■□□□□ 0.57
CCDC40-206ENST00000572083 LGI4Q8N135 537 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 RPRMLQ8N4K4 120 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 KCT2Q8NC54 265 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 ASB5Q8WWX0 329 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 TMEM125Q96AQ2 219 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 MFSD3Q96ES6 412 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 SLC30A3Q99726 388 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 IL22Q9GZX6 179 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 LANCL2Q9NS86 450 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 NAALAD2Q9Y3Q0 740 aa18.63■□□□□ 0.57
CCDC40-206ENST00000572083 FEZF1A0PJY2 475 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 MIF4GDA9UHW6 222 aaKnown RBP18.62■□□□□ 0.57
CCDC40-206ENST00000572083 HS6ST1O60243 411 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 KIF5CO60282 957 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 IMPA1P29218 277 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 CHRNB4P30926 498 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 COILP38432 576 aaPredicted RBP18.62■□□□□ 0.57
CCDC40-206ENST00000572083 IST1P53990 364 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 SNX1Q13596 522 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 CUL1Q13616 776 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 MEI1Q5TIA1 1274 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 PCGF5Q86SE9 256 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 DMRTC2Q8IXT2 367 aaPredicted RBP18.62■□□□□ 0.57
CCDC40-206ENST00000572083 ACRBPQ8NEB7 543 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 OR5T3Q8NGG3 340 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 ELP5Q8TE02 316 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 C1orf54Q8WWF1 131 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 SH2B3Q9UQQ2 575 aa18.62■□□□□ 0.57
CCDC40-206ENST00000572083 MAGEB17A8MXT2 336 aa18.61■□□□□ 0.57
CCDC40-206ENST00000572083 TOXO94900 526 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms