RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 KCT2Q8NC54 265 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 SLC13A3Q8WWT9 602 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 ATL1Q8WXF7 558 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 THAP11Q96EK4 314 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 MAGEB10Q96LZ2 347 aaPredicted RBP12.92□□□□□ -0.34
PRPF8-202ENST00000571346 EGFL8Q99944 293 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 VN1R1Q9GZP7 353 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 AGPAT4Q9NRZ5 378 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 IKZF3Q9UKT9 509 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 NTNG1Q9Y2I2 539 aa12.92□□□□□ -0.34
PRPF8-202ENST00000571346 KCNE1BA0A087WTH5 132 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 IGHV3-20A0A0C4DH32 117 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 DYTNA2CJ06 578 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 ANKUB1A6NFN9 424 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 PCDH17O14917 1159 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 TP73O15350 636 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 OR1F1O43749 312 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 PIAS1O75925 651 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 WFS1O76024 890 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 SEC24DO94855 1032 aaPredicted RBP12.91□□□□□ -0.34
PRPF8-202ENST00000571346 KLHL18O94889 574 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 BMP10O95393 424 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 SERPINA7P05543 415 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 EFNA3P52797 238 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 C2orf54Q08AI8 447 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 PCOLCEQ15113 449 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 FAM180AQ6UWF9 173 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 SBSNQ6UWP8 590 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 IGFL2Q6UWQ7 119 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 TMPRSS11BQ86T26 416 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 ZC3HC1Q86WB0 502 aaKnown RBP12.91□□□□□ -0.34
PRPF8-202ENST00000571346 PDSS2Q86YH6 399 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 SHISA5Q8N114 240 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 OR56A3Q8NH54 315 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 OR51Q1Q8NH59 317 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 SLC5A11Q8WWX8 675 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 FBXL8Q96CD0 374 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 OR4K3Q96R72 315 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 C19orf25Q9UFG5 118 aaPredicted RBP12.91□□□□□ -0.34
PRPF8-202ENST00000571346 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 DYRK1BQ9Y463 629 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 NAV2Q8IVL1 2488 aa12.91□□□□□ -0.34
PRPF8-202ENST00000571346 SCN3AQ9NY46 2000 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 A0A1W2PQ72 361 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 A1L4Q6 167 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 E7ESA3 106 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 CDC7O00311 574 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 LCMT2O60294 686 aaKnown RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 RNF224P0DH78 156 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 ITGAMP11215 1152 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 NPPBP16860 134 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 SOX11P35716 441 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 TSFMP43897 325 aaKnown RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 SLC12A2P55011 1212 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 AP2B1P63010 937 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 RGS1Q08116 209 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 CSHL1Q14406 222 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 HERC3Q15034 1050 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 PPP1R3AQ16821 1122 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 ZXDCQ2QGD7 858 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 CATSPEREQ5SY80 951 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 B3GNTL1Q67FW5 361 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 TMEM207Q6UWW9 146 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 C17orf53Q8N3J3 647 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 BBOF1Q8ND07 529 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 ZNF740Q8NDX6 193 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 ABHD11Q8NFV4 315 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 OR5T3Q8NGG3 340 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 NEIL2Q969S2 332 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 PEX11GQ96HA9 241 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 VPS39Q96JC1 886 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 PSMG3-AS1Q96PY0 264 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 TUBB6Q9BUF5 446 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 FAM129AQ9BZQ8 928 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 UNKQ9C0B0 810 aaKnown RBP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRPF8-202ENST00000571346 ZNF700Q9H0M5 742 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 SPNS1Q9H2V7 528 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 GPAMQ9HCL2 828 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 SAYSD1Q9NPB0 183 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 NSMCE4AQ9NXX6 385 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 PLA2G3Q9NZ20 509 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 TXNDC16Q9P2K2 825 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 CPAMD8Q8IZJ3 1885 aa12.9□□□□□ -0.34
PRPF8-202ENST00000571346 HIVEP3Q5T1R4 2406 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 LOC102723996A0A087X1L8 192 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 TRBC2A0A5B9 178 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 OR2W5A6NFC9 320 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 NCF1BA6NI72 391 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 NCF1CA8MVU1 366 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 RAD51CO43502 376 aa12.89□□□□□ -0.35
PRPF8-202ENST00000571346 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 NCF1P14598 390 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-202ENST00000571346 TAS2R39P59534 338 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms