RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 IL1RNP18510 177 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 COL8A1P27658 744 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 GRK3P35626 688 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 CBLBQ13191 982 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 NAE1Q13564 534 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 PPP1R7Q15435 360 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 ZRSR2Q15696 482 aaKnown RBP11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 STEAP4Q687X5 459 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 DUPD1Q68J44 220 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 ZNF787Q6DD87 383 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 CAPN13Q6MZZ7 669 aaPredicted RBP11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 MBOAT1Q6ZNC8 495 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 LANCL3Q6ZV70 420 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 ASPGQ86U10 573 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 SLC26A11Q86WA9 606 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 PDSS2Q86YH6 399 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 IGDCC3Q8IVU1 814 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 SHISA5Q8N114 240 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 MFSD9Q8NBP5 474 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 KCT2Q8NC54 265 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 PLPP5Q8NEB5 264 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 SLC13A3Q8WWT9 602 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 METTL21AQ8WXB1 218 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 LRRC39Q96DD0 335 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 LINGO1Q96FE5 620 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 OR4K3Q96R72 315 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 WDR83Q9BRX9 315 aaKnown RBP11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 DDX47Q9H0S4 455 aaKnown RBP11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 ATG10Q9H0Y0 220 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 ANKHQ9HCJ1 492 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 ABCF3Q9NUQ8 709 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 TEKT2Q9UIF3 430 aa11.69□□□□□ -0.54
SCAMP2-212ENST00000569904 FEZF1A0PJY2 475 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 ZSCAN12O43309 604 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 PRAMEF2O60811 474 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 SEC24DO94855 1032 aaPredicted RBP11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 HIST1H2AGP0C0S8 130 aaPredicted RBP11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 CDH1P12830 882 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 HIST1H2ADP20671 130 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 XCR1P46094 333 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 IL2P60568 153 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 RHAGQ02094 409 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 PWP1Q13610 501 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 MORF4L2Q15014 288 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 HERC3Q15034 1050 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 EXT1Q16394 746 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 ABHD17BQ5VST6 288 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 FAM45BPQ6NSW5 357 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 NIPAL1Q6NVV3 410 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 SBSNQ6UWP8 590 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 SYDE1Q6ZW31 735 aaPredicted RBP11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 ANKRD37Q7Z713 158 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 M1APQ8TC57 530 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 NT5CQ8TCD5 201 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 FAM45AQ8TCE6 357 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 ATL1Q8WXF7 558 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 ANKRD7Q92527 254 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 FBXL8Q96CD0 374 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 HIST1H2AHQ96KK5 128 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 HIST1H2AJQ99878 128 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 MACROD1Q9BQ69 325 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 H2AFJQ9BTM1 129 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 MMP25Q9NPA2 562 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 LANCL2Q9NS86 450 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 ASIC3Q9UHC3 531 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 TEX264Q9Y6I9 313 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 CSMD2Q7Z408 3487 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 LRBAP50851 2863 aa11.68□□□□□ -0.54
SCAMP2-212ENST00000569904 TRBC2A0A5B9 178 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 MAGEB17A8MXT2 336 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 SGK494L7N484 410 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 TP73O15350 636 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 RDH16O75452 317 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 BANF1O75531 89 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 RASAL1O95294 804 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 CRYABP02511 175 aaKnown RBP11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 STATHP02808 62 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 MYBL2P10244 700 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 TCP1P17987 556 aaKnown RBP11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 CCR8P51685 355 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 PPP1R3AQ16821 1122 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 MINDY4Q4G0A6 757 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 HECTD2Q5U5R9 776 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 LGI4Q8N135 537 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 AMER2Q8N7J2 671 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 SNF8Q96H20 258 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 ZNF354BQ96LW1 612 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 OLFM1Q99784 485 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 CLK4Q9HAZ1 481 aaKnown RBP11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 ARL15Q9NXU5 204 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 STMN3Q9NZ72 180 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 HCN3Q9P1Z3 774 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 VWA7Q9Y334 891 aa11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 NCOA6Q14686 2063 aaPredicted RBP11.67□□□□□ -0.54
SCAMP2-212ENST00000569904 NOTCH2Q04721 2471 aa11.66□□□□□ -0.54
SCAMP2-212ENST00000569904 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms