RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LUZP4Q9P127 313 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 WHRNQ9P202 907 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 MAP10Q9P2G4 905 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 SLC17A6Q9P2U8 582 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 NOVA2Q9UNW9 492 aaKnown RBP4.54□□□□□ -1.68
CLK3-219ENST00000567805 SH2B3Q9UQQ2 575 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 SNX24Q9Y343 169 aa4.54□□□□□ -1.68
CLK3-219ENST00000567805 FLNBO75369 2602 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 LOC102723996A0A087X1L8 192 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 IGHV1-45A0A0A0MS14 117 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 FAM95CA0A1B0GW59 222 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 TRBC2A0A5B9 178 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 TCP11X1B4DZS4 312 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 FFAR3O14843 346 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 GPR42O15529 346 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 NDUFS4O43181 175 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 RAD51CO43502 376 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 OR1F1O43749 312 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 LCMT2O60294 686 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 BMP10O95393 424 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 GUCA1CO95843 209 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PRR35P0CG20 571 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 C8orf89P0DMQ9 161 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ICAM2P13598 275 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 SAT1P21673 171 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 IL10P22301 178 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 GNLYP22749 145 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CASQ1P31415 396 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 BCL6P41182 706 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 UQCRFS1P47985 274 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 GLRBP48167 497 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 HNMTP50135 292 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CCR8P51685 355 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PGGT1BP53609 377 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ETF1P62495 437 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 SKP1P63208 163 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CDKL1Q00532 357 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 POU4F1Q01851 419 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CAV1Q03135 178 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 EEF1A2Q05639 463 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 SRSF1Q07955 248 aaKnown RBP eCLIP4.53□□□□□ -1.68
CLK3-219ENST00000567805 RGS1Q08116 209 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 Q0VFX4 171 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 MFAP5Q13361 173 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PWP1Q13610 501 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CSHL1Q14406 222 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ESPL1Q14674 2120 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ZNF169Q14929 603 aaPredicted RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 HERC3Q15034 1050 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PPP1R3AQ16821 1122 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 SYT16Q17RD7 645 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ZXDCQ2QGD7 858 aaPredicted RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 CRB2Q5IJ48 1285 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 FHL5Q5TD97 284 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 B3GNTL1Q67FW5 361 aaPredicted RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 FAAH2Q6GMR7 532 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 BLOC1S3Q6QNY0 202 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 TMEM205Q6UW68 189 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 TMEM207Q6UWW9 146 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ISLR2Q6UXK2 745 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 RIPOR1Q6ZS17 1223 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CYS1Q717R9 158 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PRSS41Q7RTY9 318 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ADAMTSL2Q86TH1 951 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ASPGQ86U10 573 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CUZD1Q86UP6 607 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ZC3H7AQ8IWR0 971 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 MFSD9Q8NBP5 474 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 OR9A4Q8NGU2 314 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 OR51Q1Q8NH59 317 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PYROXD1Q8WU10 500 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 SLC13A3Q8WWT9 602 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 METTL21AQ8WXB1 218 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 CDKL2Q92772 493 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 NEIL2Q969S2 332 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PYCR2Q96C36 320 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 SNRNP40Q96DI7 357 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 VPS39Q96JC1 886 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 OR4K3Q96R72 315 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 BARD1Q99728 777 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 MESP1Q9BRJ9 268 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 MCMBPQ9BTE3 642 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PHACTR1Q9C0D0 580 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 VN1R1Q9GZP7 353 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ZNF700Q9H0M5 742 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 RAB17Q9H0T7 212 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 DPH5Q9H2P9 285 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 RHOJQ9H4E5 214 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 POPDC3Q9HBV1 291 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 ANKHQ9HCJ1 492 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 GPAMQ9HCL2 828 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 AGPAT4Q9NRZ5 378 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 TXNDC16Q9P2K2 825 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 C19orf25Q9UFG5 118 aaPredicted RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 MKL2Q9ULH7 1088 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 MRPS2Q9Y399 296 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 UTP11Q9Y3A2 253 aaKnown RBP4.53□□□□□ -1.68
CLK3-219ENST00000567805 OARD1Q9Y530 152 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 PSAT1Q9Y617 370 aa4.53□□□□□ -1.68
CLK3-219ENST00000567805 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms