RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ABCC5O15440 1437 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 C9orf84Q5VXU9 1444 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 MIA2Q96PC5 1412 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 TNRQ92752 1358 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 TCP11X1B4DZS4 312 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 RNF103O00237 685 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 QDPRP09417 244 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ALOX5P09917 674 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ATP1A3P13637 1013 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ZNF17P17021 662 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ELK1P19419 428 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 CETN2P41208 172 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 GSK3BP49841 420 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 PNLIPRP2P54317 469 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 OPCMLQ14982 345 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 TMEM266Q2M3C6 531 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 TMEM44Q2T9K0 475 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 MCMDC2Q4G0Z9 681 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 NHLRC3Q5JS37 347 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 RNASEH2BQ5TBB1 312 aaKnown RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 ATP1A1-AS1Q5TC04 95 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 SLC22A15Q8IZD6 547 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ADGRF2Q8IZF7 708 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 TCEANCQ8N8B7 351 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 NFAM1Q8NET5 270 aaPredicted RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 U2AF1L4Q8WU68 220 aaKnown RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 TBATAQ96M53 351 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 CFAP57Q96MR6 1250 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 SEC62Q99442 399 aaKnown RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 SEPHS2Q99611 448 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 CTRCQ99895 268 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 OPA3Q9H6K4 179 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 KRT84Q9NSB2 600 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 HACD3Q9P035 362 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 KLK11Q9UBX7 282 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 FBXO2Q9UK22 296 aaPredicted RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 WBP11Q9Y2W2 641 aaKnown RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 C3P01024 1663 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 CLTCQ00610 1675 aaKnown RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 GON4LQ3T8J9 2241 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 CAMSAP1Q5T5Y3 1602 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ABCA6Q8N139 1617 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ZNF518AQ6AHZ1 1483 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 LRRC9Q6ZRR7 1453 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 MLH3Q9UHC1 1453 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 KIAA1107Q9UPP5 1409 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 NUP155O75694 1391 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 RNF123Q5XPI4 1314 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 MYO5CQ9NQX4 1742 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 TRGV8A0A0C4DH27 118 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 NEMP2A6NFY4 417 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 CYTIPO60759 359 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 TOM1O60784 492 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 GJB3O75712 270 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 RPLP0P05388 317 aaKnown RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 GPX3P22352 226 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 MATR3P43243 847 aaKnown RBP eCLIP1.5□□□□□ -2.17
SMG1-212ENST00000566328 CELF3Q5SZQ8 465 aaKnown RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 KRT79Q5XKE5 535 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 MFSD12Q6NUT3 480 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 TIFABQ6ZNK6 161 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 RPAINQ86UA6 219 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 SMAP1Q8IYB5 467 aaPredicted RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 MCUQ8NE86 351 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 OR10Q1Q8NGQ4 319 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 TDRD7Q8NHU6 1098 aaKnown RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 RPLP0P6Q8NHW5 317 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 USP6NLQ92738 828 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 C11orf52Q96A22 123 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 SPDL1Q96EA4 605 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 FAM71F1Q96KD3 344 aaPredicted RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 OLFM1Q99784 485 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 PRRG4Q9BZD6 226 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 DNAI2Q9GZS0 605 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 SMARCAD1Q9H4L7 1026 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 EGLN3Q9H6Z9 239 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 EQTNQ9NQ60 294 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 ABT1Q9ULW3 272 aaKnown RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 PLEKHA6Q9Y2H5 1048 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 MRPS18CQ9Y3D5 142 aaKnown RBP1.5□□□□□ -2.17
SMG1-212ENST00000566328 DIP2CQ9Y2E4 1556 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 EFCAB5A4FU69 1503 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 CCDC18Q5T9S5 1454 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 MAGI2Q86UL8 1455 aa1.5□□□□□ -2.17
SMG1-212ENST00000566328 NCOA1Q15788 1441 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 UHRF1BP1Q6BDS2 1440 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 VPS8Q8N3P4 1428 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 KIF15Q9NS87 1388 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 NPHP3Q7Z494 1330 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 LTBP4Q8N2S1 1624 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 KLF18A0A0U1RQI7 1052 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 hCG_38984A0A1B0GV85 526 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 IPO8O15397 1037 aaKnown RBP1.49□□□□□ -2.17
SMG1-212ENST00000566328 SCGB1D1O95968 90 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 DANCRP0C864 163 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ODC1P11926 461 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ZNF75DP51815 510 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ZNF133P52736 654 aaPredicted RBP1.49□□□□□ -2.17
SMG1-212ENST00000566328 ERVPABLB-1P60509 514 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ABCE1P61221 599 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms