RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SLC25A47Q6Q0C1 308 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TMEM270Q6UE05 265 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SLC24A5Q71RS6 500 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 LACC1Q8IV20 430 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 FAM89BQ8N5H3 189 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 ARHGAP45Q92619 1136 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 FBXO17Q96EF6 278 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 CDKN2AIPNLQ96HQ2 116 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 NECTIN4Q96NY8 510 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 PI4K2AQ9BTU6 479 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 FSD1Q9BTV5 496 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 IDI2Q9BXS1 227 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 NACAP1Q9BZK3 213 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 RPF1Q9H9Y2 349 aaKnown RBP4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TNIKQ9UKE5 1360 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TOP2BQ02880 1626 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SMIM30A4D0T7 59 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 HHLA1C9JL84 531 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TEX28O15482 410 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 GLCEO94923 617 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SEC24AO95486 1093 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SP1P08047 785 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 GOT1P17174 413 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 CTNNB1P35222 781 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SERPINB6P35237 376 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 HNF4AP41235 474 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 PPP2R5CQ13362 524 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SLC39A12Q504Y0 691 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 KLHL22Q53GT1 634 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 LRRC38Q5VT99 294 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 OR4C11Q6IEV9 310 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 ZNF770Q6IQ21 691 aaPredicted RBP4.14□□□□□ -1.75
LINC00560-201ENST00000564593 RAPH1Q70E73 1250 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 BTN2A1Q7KYR7 527 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 FCRLAQ7L513 359 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 LSMEM2Q8N112 164 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 GPC2Q8N158 579 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 CARNMT1Q8N4J0 409 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SPC24Q8NBT2 197 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 OR10G8Q8NGN5 311 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 DNASE2BQ8WZ79 361 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 KRT35Q92764 455 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 CUEDC2Q9H467 287 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 EGLN3Q9H6Z9 239 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 MAN2C1Q9NTJ4 1040 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TBC1D13Q9NVG8 400 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TMOD3Q9NYL9 352 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 TRPC4Q9UBN4 977 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 PCDHGA1Q9Y5H4 931 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 SNX5Q9Y5X3 404 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 COLEC10Q9Y6Z7 277 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 CEP162Q5TB80 1403 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 ATAD2BQ9ULI0 1458 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 ERICH3Q5RHP9 1530 aa4.14□□□□□ -1.75
LINC00560-201ENST00000564593 A0A087WUV0 522 aaPredicted RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 A0A087WW49 117 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 TRBV4-1A0A0J9YWV2 114 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 TRIM64A6NGJ6 449 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 TRIM64BA6NI03 449 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 VTNP04004 478 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 GNB3P16520 340 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 RPL35AP18077 110 aaKnown RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 ELAVL4P26378 380 aaKnown RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 RBMS1P29558 406 aaKnown RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 KHKP50053 298 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 NME5P56597 212 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 ARHGAP1Q07960 439 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 HNRNPDQ14103 355 aaKnown RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 PTPN14Q15678 1187 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 CCDC6Q16204 474 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 FGD3Q5JSP0 725 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 PM20D1Q6GTS8 502 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 KLHL10Q6JEL2 608 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 USP43Q70EL4 1123 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 KLHDC8AQ8IYD2 350 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 RAB42Q8N4Z0 105 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 OR5AP2Q8NGF4 316 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 TMEM190Q8WZ59 177 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 AP2M1Q96CW1 435 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 NXPE2Q96DL1 559 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 PANX3Q96QZ0 392 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 ZNF559Q9BR84 538 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 FUCA2Q9BTY2 467 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 MRPL9Q9BYD2 267 aaKnown RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 NYXQ9GZU5 481 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 P2RY12Q9H244 342 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 DISP3Q9P2K9 1392 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 ELF5Q9UKW6 265 aaPredicted RBP4.13□□□□□ -1.75
LINC00560-201ENST00000564593 STX8Q9UNK0 236 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 NCKAP1Q9Y2A7 1128 aa4.13□□□□□ -1.75
LINC00560-201ENST00000564593 PFASO15067 1338 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 A0A0A6YYC8 382 aaPredicted RBP4.12□□□□□ -1.75
LINC00560-201ENST00000564593 MTMR11A4FU01 709 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 ANTXRLA6NF34 631 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 ANKDD1BA6NHY2 528 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 I3L1I5 382 aaPredicted RBP4.12□□□□□ -1.75
LINC00560-201ENST00000564593 PGRMC2O15173 223 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 SCO2O43819 266 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 KIF5CO60282 957 aa4.12□□□□□ -1.75
LINC00560-201ENST00000564593 ACSL4O60488 711 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms