RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 EXT2Q93063 718 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 NACC2Q96BF6 587 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 MMABQ96EY8 250 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-206ENST00000563672 CD244Q9BZW8 370 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 VPS11Q9H270 941 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 ANKZF1Q9H8Y5 726 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 ZNF282Q9UDV7 671 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-206ENST00000563672 ZFP69BQ9UJL9 534 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 ARGFXA6NJG6 315 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ESPNB1AK53 854 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 TRIM49D1C9J1S8 452 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 UBXN8O00124 270 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 MAP2K7O14733 419 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 NSA2O95478 260 aaKnown RBP19.26■□□□□ 0.67
CMTM3-206ENST00000563672 SNRPAP09012 282 aaKnown RBP19.26■□□□□ 0.67
CMTM3-206ENST00000563672 SLC35G6P0C7Q6 338 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 VARSP26640 1264 aaKnown RBP19.26■□□□□ 0.67
CMTM3-206ENST00000563672 GLRBP48167 497 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ATP1A4Q13733 1029 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 CPZQ66K79 652 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ATG9BQ674R7 924 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ADGRD1Q6QNK2 874 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 PLD6Q8N2A8 252 aaKnown RBP19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ZNF843Q8N446 348 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ANKRD53Q8N9V6 530 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 NT5CQ8TCD5 201 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 STT3BQ8TCJ2 826 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.26■□□□□ 0.67
CMTM3-206ENST00000563672 MOCOSQ96EN8 888 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 TRIM55Q9BYV6 548 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ING2Q9H160 280 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 FETUBQ9UGM5 382 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 ASB1Q9Y576 335 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 SLC22A7Q9Y694 548 aa19.26■□□□□ 0.67
CMTM3-206ENST00000563672 BOD1L1Q8NFC6 3051 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 SYCE1LA8MT33 242 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 SUPT3HB4E1H0 165 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 H0YIG0 161 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 PRAMEF4O60810 478 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 SUPT3HO75486 399 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 RFPL1O75677 317 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 ZGLP1P0C6A0 271 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 EPORP19235 508 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 MMP11P24347 488 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 AVPR1BP47901 424 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 OCA2Q04671 838 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 VWA2Q5GFL6 755 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 LGSNQ5TDP6 509 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 PRAMEF9Q5VWM5 478 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 SHISA6Q6ZSJ9 500 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 MED25Q71SY5 747 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 PRSS41Q7RTY9 318 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 TMEM102Q8N9M5 508 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-206ENST00000563672 OR9A4Q8NGU2 314 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 UBTD2Q8WUN7 234 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 MIEF2Q96C03 454 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 WDR34Q96EX3 536 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 ABHD17AQ96GS6 310 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 TGIF2Q9GZN2 237 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 SLC25A18Q9H1K4 315 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 EHD1Q9H4M9 534 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 SOX17Q9H6I2 414 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-206ENST00000563672 COPG2Q9UBF2 871 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 TRPC4Q9UBN4 977 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 MAP4K5Q9Y4K4 846 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 COL6A6A6NMZ7 2263 aa19.25■□□□□ 0.67
CMTM3-206ENST00000563672 BSNQ9UPA5 3926 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 NDUFS4O43181 175 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 KLK8O60259 260 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 H2AFYO75367 372 aaKnown RBP19.24■□□□□ 0.67
CMTM3-206ENST00000563672 DNAJB5O75953 348 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 COL6A2P12110 1019 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 CXCR2P25025 360 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 AGTR2P50052 363 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 KLC1Q07866 573 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 CHAF1BQ13112 559 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 RBBP5Q15291 538 aaKnown RBP19.24■□□□□ 0.67
CMTM3-206ENST00000563672 PDK4Q16654 411 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 KLC3Q6P597 504 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 TIFABQ6ZNK6 161 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 LRRC70Q7Z2Q7 622 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 AFAP1L2Q8N4X5 818 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 SNX31Q8N9S9 440 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 TRPV3Q8NET8 790 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 PITHD1Q9GZP4 211 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-206ENST00000563672 NT5DC2Q9H857 520 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 MKKSQ9NPJ1 570 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-206ENST00000563672 ZNF358Q9NW07 568 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 P4HTMQ9NXG6 502 aa19.24■□□□□ 0.67
CMTM3-206ENST00000563672 PCSK5Q92824 1860 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 MKRN2OSH3BPM6 223 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 FFAR3O14843 346 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 CLGNO14967 610 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 GPR42O15529 346 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 CCNT2O60583 730 aaKnown RBP19.23■□□□□ 0.67
CMTM3-206ENST00000563672 IL1RNP18510 177 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 RRADP55042 308 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 MAT1AQ00266 395 aaKnown RBP19.23■□□□□ 0.67
CMTM3-206ENST00000563672 PCDH1Q08174 1060 aa19.23■□□□□ 0.67
CMTM3-206ENST00000563672 E2F2Q14209 437 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms