RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ALKBH8Q96BT7 664 aaKnown RBP5.9□□□□□ -1.46
CNOT1-204ENST00000563130 CLIP3Q96DZ5 547 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 CABS1Q96KC9 395 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 C10orf90Q96M02 699 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 CCDC77Q9BR77 488 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 EFHD1Q9BUP0 239 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 GPR87Q9BY21 358 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 CHST8Q9H2A9 424 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 SPNS1Q9H2V7 528 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 CNOT10Q9H9A5 744 aaKnown RBP5.9□□□□□ -1.46
CNOT1-204ENST00000563130 GPN2Q9H9Y4 310 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-204ENST00000563130 SLC22A11Q9NSA0 550 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 STARD5Q9NSY2 213 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 CUTCQ9NTM9 273 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 GPRC5BQ9NZH0 403 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 COPG2Q9UBF2 871 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 DHCR7Q9UBM7 475 aaKnown RBP5.9□□□□□ -1.46
CNOT1-204ENST00000563130 KCND3Q9UK17 655 aa5.9□□□□□ -1.46
CNOT1-204ENST00000563130 FER1L5A0AVI2 2057 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 hCG_2014768A0A024R1R8 64 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 A0A1B0GX78 115 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 TRBC2A0A5B9 178 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 HYKKA2RU49 373 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 SYCE1LA8MT33 242 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 DSCR3O14972 297 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 P2RX6O15547 441 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 PEX14O75381 377 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 STK16O75716 305 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 WDR47O94967 919 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 RBP1P09455 135 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 RAB40ALP0C0E4 278 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 GNAZP19086 355 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 DLSTP36957 453 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 BCL6P41182 706 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 HSPA7P48741 367 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 CCR8P51685 355 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 CDC16Q13042 620 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 DNASE1L3Q13609 305 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 HKDC1Q2TB90 917 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 FBXO48Q5FWF7 155 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 ARSJQ5FYB0 599 aaPredicted RBP5.9□□□□□ -1.47
CNOT1-204ENST00000563130 GARNL3Q5VVW2 1013 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 KLC3Q6P597 504 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 NXPE4Q6UWF7 544 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 SLCO4C1Q6ZQN7 724 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 TTLL10Q6ZVT0 673 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 ADCK2Q7Z695 626 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 CSNK1A1LQ8N752 337 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF740Q8NDX6 193 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 MR1Q95460 341 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 KIAA1143Q96AT1 154 aaPredicted RBP5.9□□□□□ -1.47
CNOT1-204ENST00000563130 WDR34Q96EX3 536 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 RUFY1Q96T51 708 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 NDC1Q9BTX1 674 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 CAPS2Q9BXY5 557 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 NLNQ9BYT8 704 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 CD244Q9BZW8 370 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 EHD1Q9H4M9 534 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 PELI2Q9HAT8 420 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 WWOXQ9NZC7 414 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 CD274Q9NZQ7 290 aa5.9□□□□□ -1.47
CNOT1-204ENST00000563130 RUVBL1Q9Y265 456 aaKnown RBP5.9□□□□□ -1.47
CNOT1-204ENST00000563130 GPC6Q9Y625 555 aaPredicted RBP5.9□□□□□ -1.47
CNOT1-204ENST00000563130 MDC1Q14676 2089 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 FEZF1A0PJY2 475 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 TXNDC9O14530 226 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 CNOT3O75175 753 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 CDH16O75309 829 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 KLF7O75840 302 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 EIF2S1P05198 315 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 AGXTP21549 392 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 PTPN4P29074 926 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 GRK3P35626 688 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 CASP2P42575 452 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 AGTR2P50052 363 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 ALDH18A1P54886 795 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 SNRPNP63162 240 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 CXADRP78310 365 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 DCDP81605 110 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 REEP5Q00765 189 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 MEF2AQ02078 507 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 FAM53BQ14153 422 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 SETDB1Q15047 1291 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 NCF4Q15080 339 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 PCBP2Q15366 365 aaKnown RBP eCLIP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 SWI5Q1ZZU3 235 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 MUM1Q2TAK8 710 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 ARHGAP40Q5TG30 622 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 ATG9BQ674R7 924 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 METTL2BQ6P1Q9 378 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 FIGNL1Q6PIW4 674 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 LRRC70Q7Z2Q7 622 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 GPR155Q7Z3F1 870 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 ANKRD53Q8N9V6 530 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 TTC29Q8NA56 475 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 MFSD9Q8NBP5 474 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 EPS8L3Q8TE67 593 aaKnown RBP5.89□□□□□ -1.47
CNOT1-204ENST00000563130 STARD8Q92502 1023 aa5.89□□□□□ -1.47
CNOT1-204ENST00000563130 RERGQ96A58 199 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms