RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ASPGQ86U10 573 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 C17orf64Q86WR6 236 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CRLF3Q8IUI8 442 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 PALM2Q8IXS6 379 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 LRRC56Q8IYG6 542 aaPredicted RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 SHISA5Q8N114 240 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 FAM98AQ8NCA5 519 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CD200R1Q8TD46 325 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CALML6Q8TD86 181 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 THAP11Q96EK4 314 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 HES7Q9BYE0 225 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 PCBD2Q9H0N5 130 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 XAB2Q9HCS7 855 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 TRMT6Q9UJA5 497 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 NPIPA1Q9UND3 350 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 MED16Q9Y2X0 877 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 DHRS7Q9Y394 339 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 COMMD10Q9Y6G5 202 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 KCNE1BA0A087WTH5 132 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 PABPN1LA6NDY0 278 aaKnown RBP12.24□□□□□ -0.45
SF3B3-202ENST00000562722 ZNF860A6NHJ4 632 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 SLC35G6P0C7Q6 338 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 TAS2R50P59544 299 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 CSNK1G2P78368 415 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 MPP1Q00013 466 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 SPINK14Q6IE38 97 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 CYHR1Q6ZMK1 362 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 HORMAD2Q8N7B1 307 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 TMEM178AQ8NBL3 297 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 KCT2Q8NC54 265 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 M1APQ8TC57 530 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 SLC13A3Q8WWT9 602 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 PEX11GQ96HA9 241 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 LURAP1Q96LR2 239 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 CCDC138Q96M89 665 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 GPR137Q96N19 417 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 SIGLEC12Q96PQ1 595 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 LPAR4Q99677 370 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 ATG10Q9H0Y0 220 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 NAALAD2Q9Y3Q0 740 aa12.24□□□□□ -0.45
SF3B3-202ENST00000562722 CPAMD8Q8IZJ3 1885 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-202ENST00000562722 GABRR3A8MPY1 467 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 WISP2O76076 250 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 SERPIND1P05546 499 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 CCDC175P0C221 793 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 CDH1P12830 882 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MLNP12872 115 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 ABOP16442 354 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 POU3F2P20265 443 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-202ENST00000562722 CD96P40200 585 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MAGEA6P43360 314 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 RGS4P49798 205 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 OR4D2P58180 307 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 ADORA2A-AS1P86434 159 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 NAE1Q13564 534 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 CAPN13Q6MZZ7 669 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-202ENST00000562722 LRRC8EQ6NSJ5 796 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 UGT3A1Q6NUS8 523 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 H3F3CQ6NXT2 135 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 AGTRAPQ6RW13 159 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MBOAT1Q6ZNC8 495 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 SLC26A11Q86WA9 606 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 PDSS2Q86YH6 399 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 SPPL2CQ8IUH8 684 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 LMNTD2Q8IXW0 634 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MYO1HQ8N1T3 1032 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MDS2Q8NDY4 140 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 TSLPQ969D9 159 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 SERPINB12Q96P63 405 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 NDNQ99608 321 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 FAM167BQ9BTA0 163 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MMP25Q9NPA2 562 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 IARS2Q9NSE4 1012 aaKnown RBP12.23□□□□□ -0.45
SF3B3-202ENST00000562722 ITGB1BP2Q9UKP3 347 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 ADAMTS6Q9UKP5 1117 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 FBXO5Q9UKT4 447 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 SH2B3Q9UQQ2 575 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 PCDHGB6Q9Y5F9 930 aa12.23□□□□□ -0.45
SF3B3-202ENST00000562722 MYO7BQ6PIF6 2116 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 ZCWPW2A0A1B0GU75 182 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 EIF3FO00303 357 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 NDC80O14777 642 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 NDUFS4O43181 175 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 MAN1A2O60476 641 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HAUS5O94927 633 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 C8GP07360 202 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HIST1H2AGP0C0S8 130 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HIST1H2ADP20671 130 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 CCND1P24385 295 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HERC3Q15034 1050 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 MAPKAPK3Q16644 382 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 HSP90AA5PQ58FG0 334 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 GALNTL5Q7Z4T8 443 aa12.22□□□□□ -0.45
SF3B3-202ENST00000562722 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-202ENST00000562722 GAS2L3Q86XJ1 694 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms