RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CCDC88CQ9P219 2028 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 TLDC2A0PJX2 215 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 H0YIV9 168 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 OR7A17O14581 309 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 CLGNO14967 610 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 FOXS1O43638 330 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 CCNT2O60583 730 aaKnown RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 KATNA1O75449 491 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 LIFP15018 202 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 WT1P19544 449 aaPredicted RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 F8A1P23610 371 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 EEF1DP29692 281 aaKnown RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 ETV4P43268 484 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 UCNP55089 124 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 DNAJB13P59910 316 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 MEF2AQ02078 507 aaPredicted RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 TRAF3Q13114 568 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 LAPTM5Q13571 262 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 GTF2H2Q13888 395 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 SLBPQ14493 270 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDH1-204ENST00000562118 MUM1Q2TAK8 710 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 KRT71Q3SY84 523 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 ZNF678Q5SXM1 525 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 LIPJQ5W064 366 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 GTF2H2CQ6P1K8 395 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 TMIGD1Q6UXZ0 262 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 MED25Q71SY5 747 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 ADCK2Q7Z695 626 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 ASPGQ86U10 573 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 SLC22A9Q8IVM8 553 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDH1-204ENST00000562118 C4orf33Q8N1A6 199 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 CAMKVQ8NCB2 501 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 CT55Q8WUE5 264 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 N4BP2L2Q92802 583 aaPredicted RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 RERGQ96A58 199 aaPredicted RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 SCYL1Q96KG9 808 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 TMEM237Q96Q45 408 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 CCNL2Q96S94 520 aaPredicted RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 NDC1Q9BTX1 674 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 EFHD1Q9BUP0 239 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 GPR87Q9BY21 358 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 ABCF3Q9NUQ8 709 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 DHCR7Q9UBM7 475 aaKnown RBP12.78□□□□□ -0.36
CDH1-204ENST00000562118 CROTQ9UKG9 612 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
CDH1-204ENST00000562118 VSTM2BA6NLU5 285 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 K7ENP7 123 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 AGPSO00116 658 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 COPEO14579 308 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 KLK10O43240 276 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 CLEC3AO75596 197 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 NSA2O95478 260 aaKnown RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 ALBP02768 609 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 SERPINA6P08185 405 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 CREB1P16220 341 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 TAC1P20366 129 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 IMPDH1P20839 514 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 SERPINB1P30740 379 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 HNF4AP41235 474 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 NAA20P61599 178 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 CHIT1Q13231 466 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 SRSF6Q13247 344 aaKnown RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 CASP8Q14790 479 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 ST3GAL2Q16842 350 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 UNC50Q53HI1 259 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 EXOC3L1Q86VI1 746 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 SRRM1Q8IYB3 904 aaKnown RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 KRT78Q8N1N4 520 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 TBC1D19Q8N5T2 526 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 TEX9Q8N6V9 391 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 AMER3Q8N944 861 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 TRPV3Q8NET8 790 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 OR6Y1Q8NGX8 325 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 CLIP3Q96DZ5 547 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 CCDC126Q96EE4 140 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 PHF21BQ96EK2 531 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 NSUN5Q96P11 429 aaKnown RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 C17orf62Q9BQA9 187 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 NLNQ9BYT8 704 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 CHST8Q9H2A9 424 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 WDR54Q9H977 334 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 STARD5Q9NSY2 213 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 PSD3Q9NYI0 1048 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 ZNF225Q9UK10 706 aa12.77□□□□□ -0.37
CDH1-204ENST00000562118 MRPS2Q9Y399 296 aaKnown RBP12.77□□□□□ -0.37
CDH1-204ENST00000562118 A0A1B0GTL3 188 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 H0YIG0 161 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 RGS16O15492 202 aaPredicted RBP12.76□□□□□ -0.37
CDH1-204ENST00000562118 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDH1-204ENST00000562118 OR1F1O43749 312 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 CNOT3O75175 753 aaKnown RBP12.76□□□□□ -0.37
CDH1-204ENST00000562118 KLK3P07288 261 aaPredicted RBP12.76□□□□□ -0.37
CDH1-204ENST00000562118 SLC35G6P0C7Q6 338 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 ITPKBP27987 946 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms