RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 RPA4Q13156 261 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 MAD2L1Q13257 205 aaPredicted RBP9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 PON2Q15165 354 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 XKR6Q5GH73 641 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 SPANXN4Q5MJ08 99 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 WDR45BQ5MNZ6 344 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 COL13A1Q5TAT6 717 aaPredicted RBP9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 IRAK1BP1Q5VVH5 260 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 METRNLQ641Q3 311 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 LCN8Q6JVE9 175 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 KRT80Q6KB66 452 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 GALNT18Q6P9A2 607 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 DOK6Q6PKX4 331 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 UNC5DQ6UXZ4 953 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 TMEM26Q6ZUK4 368 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 CLHC1Q8NHS4 586 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 DNAJB14Q8TBM8 379 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 KLK6Q92876 244 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 ZUFSPQ96AP4 578 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 HOXD1Q9GZZ0 328 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 SPNS1Q9H2V7 528 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 IKZF5Q9H5V7 419 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 COQ10BQ9H8M1 238 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 CD93Q9NPY3 652 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 MRPL40Q9NQ50 206 aaKnown RBP9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 GPRC5BQ9NZH0 403 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 NUMA1Q14980 2115 aa9.85□□□□□ -0.83
TUBGCP4-202ENST00000561691 A0A1W2PQU0 124 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 DFNA5O60443 496 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 KLF8O95600 359 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CEACAM5P06731 702 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 HRH2P25021 359 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 HNF4AP41235 474 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 EEFSECP57772 596 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PPP2CBP62714 309 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PPP2CAP67775 309 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 LIPEQ05469 1076 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CSTF3Q12996 717 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PMS2P3Q13401 168 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PWP1Q13610 501 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 GTF2H3Q13889 308 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 IMPG1Q17R60 797 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 FAM174BQ3ZCQ3 159 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 HABP4Q5JVS0 413 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CATSPEREQ5SY80 951 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 GPR107Q5VW38 600 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 HMBOX1Q6NT76 420 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CYP2R1Q6VVX0 501 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 LRRTM4Q86VH4 590 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 AMZ2Q86W34 360 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 HID1Q8IV36 788 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 GLB1L3Q8NCI6 653 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 OR7G3Q8NG95 312 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 OR5AR1Q8NGP9 310 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CSGALNACT1Q8TDX6 532 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 SLC13A3Q8WWT9 602 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MED8Q96G25 268 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MAGEB10Q96LZ2 347 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 NECTIN4Q96NY8 510 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 IL17FQ96PD4 163 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 NAA50Q9GZZ1 169 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MOV10Q9HCE1 1003 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 FBXL12Q9NXK8 326 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 VAPAQ9P0L0 249 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MAN2B2Q9Y2E5 1009 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 DNMT3AQ9Y6K1 912 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 ATG2BQ96BY7 2078 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 ARPC2O15144 300 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 SLC22A1O15245 554 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 SCN2BO60939 215 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CLPXO76031 633 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MYO1DO94832 1006 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 KRT75O95678 551 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 TBX6O95947 436 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PGRP06401 933 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PRPS2P11908 318 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 TGM1P22735 817 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CXCR2P25025 360 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 IDUAP35475 653 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 GZMMP51124 257 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MLLT10P55197 1068 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 OR4D2P58180 307 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 C21orf58P58505 322 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 MTAPQ13126 283 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 RAB39AQ14964 217 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 NRF1Q16656 503 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 CACHD1Q5VU97 1274 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 NOXRED1Q6NXP6 359 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 PRR23BQ6ZRT6 265 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 RFPL4BQ6ZWI9 263 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 TRMT11Q7Z4G4 463 aaKnown RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 VN1R5Q7Z5H4 357 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 LAS2Q8IYD9 372 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 C10orf111Q8N326 155 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 TMCO5AQ8N6Q1 288 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 TNIP2Q8NFZ5 429 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 APOLD1Q96LR9 279 aa9.84□□□□□ -0.83
TUBGCP4-202ENST00000561691 FOPNLQ96NB1 174 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms