RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SLC13A3Q8WWT9 602 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 EXT2Q93063 718 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 CD244Q9BZW8 370 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 DRC3Q9H069 523 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 VPS11Q9H270 941 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 CNOT10Q9H9A5 744 aaKnown RBP14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 GEMIN8Q9NWZ8 242 aaKnown RBP14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 GPRC5BQ9NZH0 403 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 COPG2Q9UBF2 871 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 ZFP69BQ9UJL9 534 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 CDC14AQ9UNH5 594 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 BSNQ9UPA5 3926 aa14.51□□□□□ -0.09
SNRPA1-213ENST00000560856 A0A0A6YYC8 382 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 SUPT3HB4E1H0 165 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 I3L1I5 382 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 SUPT3HO75486 399 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 SLU7O95391 586 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 CD22P20273 847 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 AHRP35869 848 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 FOLR3P41439 243 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 VSNL1P62760 191 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 PCDH1Q08174 1060 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 HYAL2Q12891 473 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 PWP1Q13610 501 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 TAOK1Q7L7X3 1001 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 PPP1R32Q7Z5V6 425 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 TMEM151AQ8N4L1 468 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 AFAP1L2Q8N4X5 818 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 NT5CQ8TCD5 201 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 STT3BQ8TCJ2 826 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 CREB3L4Q8TEY5 395 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 MZB1Q8WU39 189 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 COL26A1Q96A83 441 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 WDR34Q96EX3 536 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 AIF1LQ9BQI0 150 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 CAPS2Q9BXY5 557 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 TRIM55Q9BYV6 548 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 AICDAQ9GZX7 198 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 ADNPQ9H2P0 1102 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 EHD1Q9H4M9 534 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 MAN2B2Q9Y2E5 1009 aa14.5□□□□□ -0.09
SNRPA1-213ENST00000560856 SCN3AQ9NY46 2000 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 NSA2O95478 260 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 TBX6O95947 436 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 SHBGP04278 402 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 SBK3P0C264 359 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 SMIM10L1P0DMW3 83 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 COL6A2P12110 1019 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 FBLP22087 321 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 CASP2P42575 452 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 ATP1A4Q13733 1029 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 NDUFA9Q16795 377 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 VWA2Q5GFL6 755 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 CPZQ66K79 652 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 LRRC70Q7Z2Q7 622 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 MRGPREQ86SM8 312 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 LAPTM4BQ86VI4 370 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 PDSS2Q86YH6 399 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 OR9A4Q8NGU2 314 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 MMABQ96EY8 250 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 SMIM10Q96HG1 83 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 ARHGAP9Q9BRR9 750 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 TGIF2Q9GZN2 237 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 NT5DC2Q9H857 520 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 TUBD1Q9UJT1 453 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 ZNF490Q9ULM2 529 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 MAP4K5Q9Y4K4 846 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 SLC22A7Q9Y694 548 aa14.49□□□□□ -0.09
SNRPA1-213ENST00000560856 LRRC14BA6NHZ5 514 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SYCE1LA8MT33 242 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 H0YIG0 161 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 FFAR3O14843 346 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 GPR42O15529 346 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 NDUFS4O43181 175 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 CCNT2O60583 730 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 DNAJB5O75953 348 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 WFS1O76024 890 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 S100BP04271 92 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 ZGLP1P0C6A0 271 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SLC35G6P0C7Q6 338 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 IL1RNP18510 177 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 MMP11P24347 488 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 OTX2P32243 289 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 EFNA3P52797 238 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 CHAF1BQ13112 559 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 KCNAB2Q13303 367 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 DOC2AQ14183 400 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SLBPQ14493 270 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 NAA30Q147X3 362 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SETDB1Q15047 1291 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 TBCCQ15814 346 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 PDK4Q16654 411 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SYT16Q17RD7 645 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 LGSNQ5TDP6 509 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 KLC3Q6P597 504 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SHISA6Q6ZSJ9 500 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 VN1R5Q7Z5H4 357 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 RAB43Q86YS6 212 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 MTBPQ96DY7 904 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms