RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZNF37AP17032 561 aaPredicted RBP13.33□□□□□ -0.28
TPM1-223ENST00000560445 IVDP26440 423 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 SOX11P35716 441 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 AHRP35869 848 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 XCR1P46094 333 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 CDKL1Q00532 357 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 EEF1A2Q05639 463 aaKnown RBP13.33□□□□□ -0.28
TPM1-223ENST00000560445 PDIA2Q13087 525 aaKnown RBP13.33□□□□□ -0.28
TPM1-223ENST00000560445 MSS51Q4VC12 460 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 RBM20Q5T481 1227 aaKnown RBP13.33□□□□□ -0.28
TPM1-223ENST00000560445 VN1R4Q7Z5H5 301 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 PLD3Q8IV08 490 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 TRPV3Q8NET8 790 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 TTLQ8NG68 377 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 OR51Q1Q8NH59 317 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 BRIX1Q8TDN6 353 aaKnown RBP13.33□□□□□ -0.28
TPM1-223ENST00000560445 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 HAS2Q92819 552 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 C8orf44Q96CB5 159 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 TM4SF19Q96DZ7 209 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 AIF1LQ9BQI0 150 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 CAPS2Q9BXY5 557 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 OLAHQ9NV23 265 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 PTGFRNQ9P2B2 879 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 HIVEP3Q5T1R4 2406 aa13.33□□□□□ -0.28
TPM1-223ENST00000560445 COL12A1Q99715 3063 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 A0A088AWK7 358 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 FAM187AA6NFU0 413 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 EIF3HO15372 352 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM1-223ENST00000560445 TTI1O43156 1089 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 NDUFS4O43181 175 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 OR1F1O43749 312 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 TSPAN12O95859 305 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 NPPBP16860 134 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 IL1RNP18510 177 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
TPM1-223ENST00000560445 GABRB3P28472 473 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 TAS2R50P59544 299 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 MRPL49Q13405 166 aaKnown RBP13.32□□□□□ -0.28
TPM1-223ENST00000560445 PHKG1Q16816 387 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 EIF2S3LQ2VIR3 472 aaKnown RBP13.32□□□□□ -0.28
TPM1-223ENST00000560445 PLAG1Q6DJT9 500 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 CPEB2Q7Z5Q1 589 aaKnown RBP13.32□□□□□ -0.28
TPM1-223ENST00000560445 LAPTM4BQ86VI4 370 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 DTWD1Q8N5C7 304 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 HORMAD2Q8N7B1 307 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 FBXO36Q8NEA4 188 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 ARMC2Q8NEN0 867 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 OR4K1Q8NGD4 311 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 ZCCHC10Q8TBK6 192 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 PYROXD1Q8WU10 500 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 FAR1Q8WVX9 515 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 ZNF354BQ96LW1 612 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 EGFL8Q99944 293 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 VN1R1Q9GZP7 353 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM1-223ENST00000560445 RHOJQ9H4E5 214 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 CNOT10Q9H9A5 744 aaKnown RBP13.32□□□□□ -0.28
TPM1-223ENST00000560445 PELI2Q9HAT8 420 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
TPM1-223ENST00000560445 ZFP69BQ9UJL9 534 aa13.32□□□□□ -0.28
TPM1-223ENST00000560445 DOPEY1Q5JWR5 2465 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 FAM95CA0A1B0GW59 222 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 E7ESA3 106 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 PSMD12O00232 456 aaPredicted RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 BANF1O75531 89 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 KLHL18O94889 574 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 F7P08709 466 aaPredicted RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 GSTA2P09210 222 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 TNFSF10P50591 281 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 MAT1AQ00266 395 aaKnown RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 TIAL1Q01085 375 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-223ENST00000560445 POU4F1Q01851 419 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 CAV1Q03135 178 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 ACTN3Q08043 901 aaPredicted RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 Q0VFX4 171 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 CBLBQ13191 982 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 PCOLCEQ15113 449 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.31□□□□□ -0.289e-6■■■■□ 24.9
TPM1-223ENST00000560445 FAAH2Q6GMR7 532 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 ZC3HC1Q86WB0 502 aaKnown RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 IGDCC3Q8IVU1 814 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 ZBED8Q8IZ13 594 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 SLC5A8Q8N695 610 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 OR1N1Q8NGS0 311 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 DNAJB8Q8NHS0 232 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 NT5CQ8TCD5 201 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 GRHL3Q8TE85 626 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 MAGEB10Q96LZ2 347 aaPredicted RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 CYTH2Q99418 400 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 LPAR4Q99677 370 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 TRIM31Q9BZY9 425 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
TPM1-223ENST00000560445 PITHD1Q9GZP4 211 aaPredicted RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 ZBTB20Q9HC78 741 aaPredicted RBP13.31□□□□□ -0.28
TPM1-223ENST00000560445 HCN3Q9P1Z3 774 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms