RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SERTAD4Q9NUC0 356 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 RNF6Q9Y252 685 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 GXYLT2A0PJZ3 443 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 PROM1O43490 865 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 SCGB1D1O95968 90 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 HOXD8P13378 290 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 HNRNPA0Q13151 305 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM119Q4V9L6 283 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZC3H14Q6PJT7 736 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 PAOXQ6QHF9 649 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR6K2Q8NGY2 324 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 TM9SF4Q92544 642 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZBTB26Q9HCK0 441 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 NANSQ9NR45 359 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 DHDHQ9UQ10 334 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 C20orf202A1L168 122 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 TLR5O60602 858 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 RPL13AP40429 203 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 CDH15P55291 814 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 GSTM4Q03013 218 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 SERINC3Q13530 473 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 SYT16Q17RD7 645 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ARL13AQ5H913 290 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMPRSS9Q7Z410 1059 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 SMG8Q8ND04 991 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 MTFR1LQ9H019 292 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ADARB2Q9NS39 739 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 KCNIP1Q9NZI2 227 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 HMX3A6NHT5 357 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 CNOT4O95628 575 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 RAB3BP20337 219 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 DNASE1P24855 282 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF829Q3KNS6 432 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 MAB21L3Q8N8X9 362 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 RRNAD1Q96FB5 475 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 P2RY11Q96G91 374 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 FZD4Q9ULV1 537 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ART1P52961 327 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 DSC3Q14574 896 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 MAP4K3Q8IVH8 894 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 DAZAP1Q96EP5 407 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 PER3P56645 1201 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ERVK-16P61578 105 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF662Q6ZS27 426 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 BEX2Q9BXY8 128 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 METTL7AQ9H8H3 244 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 BEX1Q9HBH7 125 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF286AQ9HBT8 521 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 YARS2Q9Y2Z4 477 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 INMT-MINDY4F8WBC2 141 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 H3BSH0 61 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 TREHO43280 583 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 NFATC1O95644 943 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 FCER2P06734 321 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 DECR1Q16698 335 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR6N1Q8NGY5 312 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 SECISBP2Q96T21 854 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 PTBP2Q9UKA9 531 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 THBS2P35442 1172 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 FABP6P51161 128 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 SMAD3P84022 425 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 UBE2UQ5VVX9 321 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ANKS1BQ7Z6G8 1248 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 MON1AQ86VX9 555 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 C3orf58Q8NDZ4 430 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 KCNJ9Q92806 393 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 LENG8Q96PV6 779 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 MRM3Q9HC36 420 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 EI24O14681 340 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 AFF3P51826 1226 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 MALLQ13021 153 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 C14orf28Q4W4Y0 310 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 FAM71AQ8IYT1 594 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 BEST4Q8NFU0 473 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 HAS2Q92819 552 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 BSCL2Q96G97 398 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 PORCNQ9H237 461 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 ASF1BQ9NVP2 202 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 PTCH2Q9Y6C5 1203 aa13.46□□□□□ -0.25
CSPG4P12-202ENST00000559989 PRPS1L1P21108 318 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 CYCSP99999 105 aaKnown RBP13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 DEFA6Q01524 100 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 TEX44Q53QW1 395 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR2T5Q6IEZ7 315 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 GALNT10Q86SR1 603 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 PYROXD2Q8N2H3 581 aa13.46□□□□□ -0.26
CSPG4P12-202ENST00000559989 MARVELD2Q8N4S9 558 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms