RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 FUCA1P04066 466 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 RETP07949 1114 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 C1GALT1C1LP0DN25 315 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 ACADLP28330 430 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 GDI1P31150 447 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 MAT2AP31153 395 aaKnown RBP10.21□□□□□ -0.77
CUX1-217ENST00000558836 TIA1P31483 386 aaKnown RBP eCLIP10.21□□□□□ -0.771e-6■■■■■ 30.6
CUX1-217ENST00000558836 TIE1P35590 1138 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 TAS2R50P59544 299 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 VLDLRP98155 873 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 CTBSQ01459 385 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 MEP1AQ16819 746 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 PRSS53Q2L4Q9 553 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 BCL7AQ4VC05 210 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 C2orf27AQ580R0 203 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 COX20Q5RI15 118 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 PNCKQ6P2M8 343 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 PARM1Q6UWI2 310 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 ZZZ3Q8IYH5 903 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 OR8J2Q8NGG1 315 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 OR4A15Q8NGL6 344 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 OR2L2Q8NH16 312 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 GANCQ8TET4 914 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 NCSTNQ92542 709 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 SFXN1Q9H9B4 322 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 CCDC177Q9NQR7 707 aaPredicted RBP10.21□□□□□ -0.77
CUX1-217ENST00000558836 C5AR2Q9P296 337 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 TAC3Q9UHF0 121 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 MOSPD1Q9UJG1 213 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 CDC14AQ9UNH5 594 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 DMTF1Q9Y222 760 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 PLEKHM1Q9Y4G2 1056 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 PCDHGA8Q9Y5G5 932 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 HEATR5BQ9P2D3 2071 aa10.21□□□□□ -0.77
CUX1-217ENST00000558836 PRAMEF33A0A0G2JMD5 474 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 CRATP43155 626 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 TPD52P55327 224 aaPredicted RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 HBA1P69905 142 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 ROR2Q01974 943 aaKnown RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 KCNAB2Q13303 367 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 PMS2P3Q13401 168 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 EIF4HQ15056 248 aaKnown RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 VMACQ2NL98 169 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 TMEM259Q4ZIN3 620 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 CWF19L1Q69YN2 538 aaKnown RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 LPCAT2Q7L5N7 544 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 CLVS1Q8IUQ0 354 aaPredicted RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 LRRC56Q8IYG6 542 aaPredicted RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 FCRL1Q96LA6 429 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 OSBPL10Q9BXB5 764 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 OR52A5Q9H2C5 316 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 EPB41L1Q9H4G0 881 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 FZD3Q9NPG1 666 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 NDUFA13Q9P0J0 144 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 IFT80Q9P2H3 777 aaPredicted RBP10.21□□□□□ -0.78
CUX1-217ENST00000558836 EBF1Q9UH73 591 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 STON1Q9Y6Q2 735 aa10.21□□□□□ -0.78
CUX1-217ENST00000558836 A0A0G2JN53 185 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 C1QTNF3-AMACRE9PGA6 284 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 C6orf47O95873 294 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 AGXTP21549 392 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 KDELR2P33947 212 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 CDK3Q00526 305 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 DPTQ07507 201 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 C2orf80Q0P641 193 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 LSAMPQ13449 338 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 B3GNT6Q6ZMB0 384 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 USP51Q70EK9 711 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 GALNT13Q8IUC8 556 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 YAF2Q8IY57 180 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 FAM9CQ8IZT9 166 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 HDDC3Q8N4P3 179 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 MYADMQ96S97 322 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 MBOAT4Q96T53 435 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 ABCG4Q9H172 646 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 EPHX3Q9H6B9 360 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 XKR8Q9H6D3 395 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 BRF2Q9HAW0 419 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 CD320Q9NPF0 282 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 DMRT3Q9NQL9 472 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 FAM118AQ9NWS6 357 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 WDR37Q9Y2I8 494 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 NUP210Q8TEM1 1887 aaPredicted RBP10.2□□□□□ -0.78
CUX1-217ENST00000558836 A0A087WXM4 84 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 H7BY64 318 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 KLHL18O94889 574 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 CCNDBP1O95273 360 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 ACP5P13686 325 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 ETFAP13804 333 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 GPX2P18283 190 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 ALDH3B2P48448 385 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 TRPC1P48995 793 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 VASPP50552 380 aaPredicted RBP10.2□□□□□ -0.78
CUX1-217ENST00000558836 CLCNKAP51800 687 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 CRYBA2P53672 197 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 ERVK-21P61565 698 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 PPP2R2BQ00005 443 aa10.2□□□□□ -0.78
CUX1-217ENST00000558836 SIM2Q14190 667 aaPredicted RBP10.2□□□□□ -0.78
CUX1-217ENST00000558836 KIAA1211LQ6NV74 962 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms