RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MRPL15Q9P015 296 aaKnown RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 ZDHHC2Q9UIJ5 367 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 UPK3BL1B0FP48 263 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 UPK3BL2E5RIL1 263 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 IL7P13232 177 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 PVALBP20472 110 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 WDR4P57081 412 aaKnown RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 GJD3Q8N144 294 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 SUN3Q8TAQ9 357 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TAC3Q9UHF0 121 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 DEPDC5O75140 1603 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TCRBV7S3A2A0A539 114 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 ZNF726A6NNF4 738 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 SIX3O95343 332 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 SFTPBP07988 381 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 SPARCP09486 303 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 GDF5P43026 501 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 KHKP50053 298 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 NFKB2Q00653 900 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 FAPQ12884 760 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 CRHR2Q13324 411 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 CRTC1Q6UUV9 634 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TMCO2Q7Z6W1 182 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 WDR6Q9NNW5 1121 aaKnown RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 A0A1B0GVC2 190 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 ZNF860A6NHJ4 632 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 GRIA1P42261 906 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 MECP2P51608 486 aaKnown RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 CLCNKAP51800 687 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 NNATQ16517 81 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 ALG10Q5BKT4 473 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 COL21A1Q96P44 957 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TP63Q9H3D4 680 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 SOX17Q9H6I2 414 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 ABI3Q9P2A4 366 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 ZNF282Q9UDV7 671 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 BLOC1S5-TXNDC5H3BN57 136 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 TLX2O43763 284 aaPredicted RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 CFHP08603 1231 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 MMP8P22894 467 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 DUS1LQ6P1R4 473 aaKnown RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 ZNF641Q96N77 438 aaPredicted RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 A0A1W2PPK0 400 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 STMND1H3BQB6 276 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 J3KR12 359 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 GSTT2P0CG29 244 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 SYPL2Q5VXT5 272 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 TBL1XR1Q9BZK7 514 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPG11-210ENST00000558319 FZD10Q9ULW2 581 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 CLCA1A8K7I4 914 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 BCHEP06276 602 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 GNSP15586 552 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 TEAD2Q15562 447 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 HSDL2Q6YN16 418 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 NFKBIDQ8NI38 313 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 NRP1O14786 923 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 HSD3B1P14060 373 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 ACVRL1P37023 503 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 ADH7P40394 386 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.247e-12■■■■■ 43.3
SPG11-210ENST00000558319 SLC7A5P1Q8MH63 180 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 TAS2R10Q9NYW0 307 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 CYP3A7-CYP3A51PA0A087WV96 503 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 SLITRK5O94991 958 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 CYP3A7P24462 503 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 LILRA4P59901 499 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 RAB8AP61006 207 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 SLBPQ14493 270 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPG11-210ENST00000558319 RAB39AQ14964 217 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 TIGD5Q53EQ6 642 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 TSTD2Q5T7W7 516 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 STRADAQ7RTN6 431 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 SLC16A9Q7RTY1 509 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 ABHD5Q8WTS1 349 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 PPIL3Q9H2H8 161 aaKnown RBP13.56□□□□□ -0.24
SPG11-210ENST00000558319 PCDHGB7Q9Y5F8 929 aa13.56□□□□□ -0.24
SPG11-210ENST00000558319 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 IFNA2P01563 188 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 ITGA5P08648 1049 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 CKMT1AP12532 417 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 TAS2R39P59534 338 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 OR4F3Q6IEY1 312 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 AMZ2Q86W34 360 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 UCK2Q9BZX2 261 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 ERVW-1Q9UQF0 538 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 CXCR1P25024 350 aa13.55□□□□□ -0.24
SPG11-210ENST00000558319 COMMD7Q86VX2 200 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms