RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 UCKL1Q9NWZ5 548 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 RPS6KA6Q9UK32 745 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 AP3M1Q9Y2T2 418 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 PARP14Q460N5 1801 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 MICAL3Q7RTP6 2002 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 PCP4L1A6NKN8 68 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 H3BRB1 525 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 GFRA2O00451 464 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 TSPAN4O14817 238 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 IRAK2O43187 625 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 OR7A10O76100 309 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 CPSF4O95639 269 aaKnown RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 C9P02748 559 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 CHRM5P08912 532 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 SELPP16109 830 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 POLR2CP19387 275 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 M6PRP20645 277 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 SOX3P41225 446 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 CDKN2CP42773 168 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 PRIM2P49643 509 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 RORCP51449 518 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 DGKEP52429 567 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 RAB25P57735 213 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 ABHD18Q0P651 414 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 ZNF267Q14586 743 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 PTCHD3Q3KNS1 767 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 TOR2AQ5JU69 321 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 ANGPTL8Q6UXH0 198 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 ZNF621Q6ZSS3 439 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 EIF3MQ7L2H7 374 aaKnown RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 GLT6D1Q7Z4J2 308 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 GLCCI1Q86VQ1 547 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 SLC43A3Q8NBI5 491 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 C19orf18Q8NEA5 215 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 HERVK_113Q902F9 699 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 PMEPA1Q969W9 287 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 MYLPFQ96A32 169 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 PHF21AQ96BD5 680 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 MTERF3Q96E29 417 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 FEVQ99581 238 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 CPPED1Q9BRF8 314 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 HDHD5Q9BXW7 423 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 TRIM45Q9H8W5 580 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-204ENST00000558288 BPIFA1Q9NP55 256 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 TMEM45AQ9NWC5 275 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 WWOXQ9NZC7 414 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 MALT1Q9UDY8 824 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 POLHQ9Y253 713 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 HS3ST4Q9Y661 456 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 CLCA3PQ9Y6N3 262 aa4.9□□□□□ -1.62
HMG20A-204ENST00000558288 DNAJC25-GNG10A0A024R161 153 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TRAV19A0A0A6YYK7 116 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 B4DXG7 233 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 HAS3O00219 553 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 OR7A17O14581 309 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 PDE9AO76083 593 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 EPN2O95208 641 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 MMP2P08253 660 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 ATXN1LP0C7T5 689 aaKnown RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TRAPPC2P0DI81 140 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TRAPPC2BP0DI82 140 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 PKMP14618 531 aaKnown RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 RPS3P23396 243 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 NUDT1P36639 197 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 RPS19P39019 145 aaKnown RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 MLLT3P42568 568 aaPredicted RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 PSEN2P49810 448 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TARDBPQ13148 414 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 SLC14A1Q13336 389 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 IHHQ14623 411 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 VEPH1Q14D04 833 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 KIAA0040Q15053 153 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 CPSF6Q16630 551 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TATDN3Q17R31 274 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TRIQKQ629K1 86 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 NADSYN1Q6IA69 706 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 GDF6Q6KF10 455 aaPredicted RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 SUSD1Q6UWL2 747 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF467Q7Z7K2 595 aaPredicted RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 PLCZ1Q86YW0 608 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 ZZZ3Q8IYH5 903 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 BRSK1Q8TDC3 778 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 MSANTD3Q96H12 275 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 CRELD1Q96HD1 420 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 HRASLS5Q96KN8 279 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 PANX1Q96RD7 426 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 MCCC1Q96RQ3 725 aaPredicted RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 CCM2Q9BSQ5 444 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 KATNAL1Q9BW62 490 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 TTLL2Q9BWV7 592 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 NSUN3Q9H649 340 aaKnown RBP4.9□□□□□ -1.63
HMG20A-204ENST00000558288 EPHX3Q9H6B9 360 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 ZC4H2Q9NQZ6 224 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 FKBP14Q9NWM8 211 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 CMAHPQ9Y471 501 aa4.9□□□□□ -1.63
HMG20A-204ENST00000558288 A8MUA0 341 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 TNFRSF11BO00300 401 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 SLC28A1O00337 649 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 WNT9AO14904 365 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms