RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 EGLN3Q9H6Z9 239 aa3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 RPF1Q9H9Y2 349 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 GPR173Q9NS66 373 aa3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 MAN2C1Q9NTJ4 1040 aa3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 TBC1D13Q9NVG8 400 aa3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 INTS10Q9NVR2 710 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 FBXL4Q9UKA2 621 aa3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 PFASO15067 1338 aa3.84□□□□□ -1.79
EFCAB11-213ENST00000557685 MTMR11A4FU01 709 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 TTI1O43156 1089 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 SEC24AO95486 1093 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 VCLP18206 1134 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 RBMS1P29558 406 aaKnown RBP3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 SP3Q02447 781 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 TEFQ10587 303 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 C2orf76Q3KRA6 126 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 ZNF542PQ5EBM4 170 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 FGD3Q5JSP0 725 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 FFAR4Q5NUL3 377 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 TMEM270Q6UE05 265 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 LEKR1Q6ZMV7 388 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 RAPH1Q70E73 1250 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 SLC24A5Q71RS6 500 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 LACC1Q8IV20 430 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 CCDC83Q8IWF9 413 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 KLHDC8BQ8IXV7 354 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 MRGPRDQ8TDS7 321 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 ZNRF4Q8WWF5 429 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 NXPE2Q96DL1 559 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 RASL10BQ96S79 203 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 PRMT1Q99873 361 aaKnown RBP3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 PI4K2AQ9BTU6 479 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 FUCA2Q9BTY2 467 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 CACNG6Q9BXT2 260 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 SLC5A7Q9GZV3 580 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 P2RY12Q9H244 342 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 RAB9BQ9NP90 201 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 EXOC1Q9NV70 894 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 PANK4Q9NVE7 773 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 CWC25Q9NXE8 425 aaPredicted RBP3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 SPG21Q9NZD8 308 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 PCDHGA1Q9Y5H4 931 aa3.83□□□□□ -1.8
EFCAB11-213ENST00000557685 NPHP3Q7Z494 1330 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 A0A087WUV0 522 aaPredicted RBP3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 A0A1W2PRV1 198 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 FAM149AA5PLN7 773 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 ANTXRLA6NF34 631 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 H3BMM5 538 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 GLCEO94923 617 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 GOT1P17174 413 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 RPL35AP18077 110 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 CTNNB1P35222 781 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 HNF4AP41235 474 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 LEPRP48357 1165 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 KIAA1024LP59773 190 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 SLC34A1Q06495 639 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 PPA1Q15181 289 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 SLC39A12Q504Y0 691 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 ARMCX4Q5H9R4 360 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 PM20D1Q6GTS8 502 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 USP43Q70EL4 1123 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 BTN2A1Q7KYR7 527 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 AQP12AQ8IXF9 295 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 CARNMT1Q8N4J0 409 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 SPC24Q8NBT2 197 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 DDHD1Q8NEL9 900 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 PDLIM5Q96HC4 596 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 GMPPAQ96IJ6 420 aaPredicted RBP3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 LRR1Q96L50 414 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 NECTIN4Q96NY8 510 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 PIGQQ9BRB3 760 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 FSD1Q9BTV5 496 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 C5orf66Q9H5L9 145 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 MID1IP1Q9NPA3 183 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 MRPL17Q9NRX2 175 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 TRPC4Q9UBN4 977 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 EPHA6Q9UF33 1036 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 PILRBQ9UKJ0 227 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 STX8Q9UNK0 236 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 WDR37Q9Y2I8 494 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 SNX5Q9Y5X3 404 aa3.82□□□□□ -1.8
EFCAB11-213ENST00000557685 TRBV4-1A0A0J9YWV2 114 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 ANKDD1BA6NHY2 528 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 A8MVM7 634 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 E5RGE8 158 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 KIF5CO60282 957 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 ACSL4O60488 711 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 KINO60870 393 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 SERPINB6P35237 376 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 OR3A2P47893 321 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 LBX1P52954 281 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 OR1D5P58170 312 aa3.81□□□□□ -1.8
EFCAB11-213ENST00000557685 DCDC1P59894 354 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms