RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FOLR2P14207 255 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 RIPK4P57078 832 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 EXT1Q16394 746 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 ALDH1L2Q3SY69 923 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 NOTUMQ6P988 496 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 LEKR1Q6ZMV7 388 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 ARHGAP22Q7Z5H3 698 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 PIGBQ92521 554 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 ZNF577Q9BSK1 485 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 TDRD1Q9BXT4 1180 aaKnown RBP3.31□□□□□ -1.88
VRK1-207ENST00000557352 EQTNQ9NQ60 294 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 DPP3Q9NY33 737 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 CTSZQ9UBR2 303 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 WIPI2Q9Y4P8 454 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 HCFC1P51610 2035 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 LY75O60449 1722 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 MEGF6O75095 1541 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 SLIT2O94813 1529 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 DISP2A7MBM2 1401 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 HEG1Q9ULI3 1381 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 KIF16BQ96L93 1317 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 GPR75-ASB3A0A0A6YYF3 556 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 A0A1W2PQ09 198 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 AGAP14A8MT82 685 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 PHOX2AO14813 284 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 TFECO14948 347 aaPredicted RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 TOM1O60784 492 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 HOXD4P09016 255 aaPredicted RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 HOXB7P09629 217 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 DUX4L4P0CJ87 422 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 HAPLN1P10915 354 aaPredicted RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 RPL35AP18077 110 aaKnown RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 PIK3R1P27986 724 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 CD300CQ08708 224 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 CDH18Q13634 790 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 TMEM211Q6ICI0 200 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 FAM180BQ6P0A1 224 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 C4orf50Q6ZRC1 276 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 ZFAND4Q86XD8 727 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 MMD2Q8IY49 270 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 GUF1Q8N442 669 aaKnown RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 POC5Q8NA72 575 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 THAP8Q8NA92 274 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 TOMM40LQ969M1 308 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 C4orf45Q96LM5 186 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 LGMNQ99538 433 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 LPAR4Q99677 370 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 OVOL2Q9BRP0 275 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 HOXD1Q9GZZ0 328 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 OPA3Q9H6K4 179 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 SYNCQ9H7C4 482 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
VRK1-207ENST00000557352 ZNF215Q9UL58 517 aaPredicted RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 PTRH2Q9Y3E5 179 aaKnown RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 TMED3Q9Y3Q3 217 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 MYH14Q7Z406 1995 aaKnown RBP3.3□□□□□ -1.88
VRK1-207ENST00000557352 BTAF1O14981 1849 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 ARID2Q68CP9 1835 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 BRWD3Q6RI45 1802 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 LAMB2P55268 1798 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 NHSQ6T4R5 1651 aa3.3□□□□□ -1.88
VRK1-207ENST00000557352 LOC102723996A0A087X1L8 192 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 FPGTO14772 594 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 TEX28O15482 410 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 CEACAM4O75871 244 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 IGHV2-70P01814 119 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 HSP90AB1P08238 724 aaKnown RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 HMOX1P09601 288 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 DANCRP0C864 163 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 BCL3P20749 454 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 PDHA2P29803 388 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 CAPGP40121 348 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 SOX3P41225 446 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 ZFP36L2P47974 494 aaKnown RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 NRIP1P48552 1158 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 NAP1L1P55209 391 aaKnown RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 CDH13P55290 713 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 TAB1Q15750 504 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 DUSP28Q4G0W2 176 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 ADGRA1Q86SQ6 560 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 ZNF595Q8IYB9 648 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 SLC37A3Q8NCC5 494 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 LPGAT1Q92604 370 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 SYN2Q92777 582 aaPredicted RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 SLAMF9Q96A28 289 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 SPDL1Q96EA4 605 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 FAM120BQ96EK7 910 aaKnown RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 CNRIP1Q96F85 164 aaPredicted RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 SFXN2Q96NB2 322 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 CCDC3Q9BQI4 270 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 MTMR12Q9C0I1 747 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 MAF1Q9H063 256 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 TUBB1Q9H4B7 451 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 TLE6Q9H808 572 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 CHST11Q9NPF2 352 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 FBXO2Q9UK22 296 aaPredicted RBP3.29□□□□□ -1.88
VRK1-207ENST00000557352 PADI2Q9Y2J8 665 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 BCORQ6W2J9 1755 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 TJP1Q07157 1748 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms