RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MACROD1Q9BQ69 325 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 TRIM54Q9BYV2 358 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 RNF32Q9H0A6 362 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
SNX6-210ENST00000557341 TEKT2Q9UIF3 430 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 CHMP2BQ9UQN3 213 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 SGK494L7N484 410 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
SNX6-210ENST00000557341 CLDN1O95832 211 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 ELK3P41970 407 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 AGTR2P50052 363 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 TEDDM1Q5T9Z0 273 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 HECTD2Q5U5R9 776 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 ABHD17BQ5VST6 288 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 DUPD1Q68J44 220 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 SYDE1Q6ZW31 735 aaPredicted RBP13.39□□□□□ -0.27
SNX6-210ENST00000557341 CPEB2Q7Z5Q1 589 aaKnown RBP13.39□□□□□ -0.27
SNX6-210ENST00000557341 SLC26A11Q86WA9 606 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 IGDCC3Q8IVU1 814 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 MFSD9Q8NBP5 474 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 KCT2Q8NC54 265 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 OR56A3Q8NH54 315 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 SLC13A3Q8WWT9 602 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 ATL1Q8WXF7 558 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 LRRC39Q96DD0 335 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 IMMP1LQ96LU5 166 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNX6-210ENST00000557341 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 OSGIN2Q9Y236 505 aa13.39□□□□□ -0.27
SNX6-210ENST00000557341 OR5H15A6NDH6 313 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 NDUFS4O43181 175 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 LCMT2O60294 686 aaKnown RBP13.38□□□□□ -0.27
SNX6-210ENST00000557341 RDH16O75452 317 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 WDPCPO95876 746 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 F10P00742 488 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 ENO2P09104 434 aaPredicted RBP13.38□□□□□ -0.27
SNX6-210ENST00000557341 NPPBP16860 134 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 IVDP26440 423 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 CCR8P51685 355 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 SKP1P63208 163 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 DR1Q01658 176 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 HERC3Q15034 1050 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 HP1BP3Q5SSJ5 553 aaPredicted RBP13.38□□□□□ -0.27
SNX6-210ENST00000557341 PLAG1Q6DJT9 500 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 TRMT10BQ6PF06 316 aaKnown RBP13.38□□□□□ -0.27
SNX6-210ENST00000557341 PDSS2Q86YH6 399 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 TBC1D19Q8N5T2 526 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 ABHD11Q8NFV4 315 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 NR4A3Q92570 626 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 FBXL8Q96CD0 374 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 OR1F2PQ96R84 312 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 CYTH2Q99418 400 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 OLFM1Q99784 485 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 SARGQ9BW04 601 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 KCNF1Q9H3M0 494 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 PLAC1Q9HBJ0 212 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 ZFATQ9P243 1243 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 NAALAD2Q9Y3Q0 740 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 SLC22A7Q9Y694 548 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 LRBAP50851 2863 aa13.38□□□□□ -0.27
SNX6-210ENST00000557341 NOTCH2Q04721 2471 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 IGHV3-20A0A0C4DH32 117 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 LRRTM2O43300 516 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 GUCA1CO95843 209 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 MYBL2P10244 700 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 ZNF37AP17032 561 aaPredicted RBP13.37□□□□□ -0.27
SNX6-210ENST00000557341 IL10P22301 178 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 TDGF1P3P51864 188 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 ARL4CP56559 192 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 MEF2AQ02078 507 aaPredicted RBP13.37□□□□□ -0.27
SNX6-210ENST00000557341 EXT1Q16394 746 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 ZNF324BQ6AW86 544 aaPredicted RBP13.37□□□□□ -0.27
SNX6-210ENST00000557341 NIPAL1Q6NVV3 410 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 SBSNQ6UWP8 590 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 ANKRD37Q7Z713 158 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 KLHL7Q8IXQ5 586 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 OR4K1Q8NGD4 311 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 SNF8Q96H20 258 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 PWWP2AQ96N64 755 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 OR4K3Q96R72 315 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 TAAR6Q96RI8 345 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 WDR83Q9BRX9 315 aaKnown RBP13.37□□□□□ -0.27
SNX6-210ENST00000557341 RBCK1Q9BYM8 510 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 TEX264Q9Y6I9 313 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 MYO7BQ6PIF6 2116 aa13.37□□□□□ -0.27
SNX6-210ENST00000557341 ZNF860A6NHJ4 632 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 OR1F1O43749 312 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
SNX6-210ENST00000557341 SEC31AO94979 1220 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms