RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CDC73Q6P1J9 531 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 GSG1LQ6UXU4 331 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 B3GNT6Q6ZMB0 384 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 FOXL2NBQ6ZUU3 175 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 MUC20Q8N307 709 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 ARL14Q8N4G2 192 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CSNK2A3Q8NEV1 391 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 MAPK15Q8TD08 544 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 C2orf15Q8WU43 125 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 UCMAQ8WVF2 138 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SORCS1Q8WY21 1168 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 NR4A3Q92570 626 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 BIRC7Q96CA5 298 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SGF29Q96ES7 293 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 UHRF2Q96PU4 802 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 NR1H4Q96RI1 486 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 PAIP1Q9H074 479 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 RWDD1Q9H446 243 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 ESRP2Q9H6T0 727 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 TCF7L2Q9NQB0 619 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SPHK2Q9NRA0 654 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 DDX43Q9NXZ2 648 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 CHORDC1Q9UHD1 332 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 GTF3C4Q9UKN8 822 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 UBQLN1Q9UMX0 589 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 KCNJ14Q9UNX9 436 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 NCKAP1Q9Y2A7 1128 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CRYL1Q9Y2S2 319 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 LOXL2Q9Y4K0 774 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CFAP46Q8IYW2 2715 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 TMEM131Q92545 1883 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 PTPRJQ12913 1337 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 FAM72CH0Y354 149 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 TULP2O00295 520 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 MID1O15344 667 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 KDM4BO94953 1096 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 KRT7P08729 469 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 CYP11B2P19099 503 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 BDNFP23560 247 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 CHMLP26374 656 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 CD27P26842 260 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 EIF2DP41214 584 aaKnown RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 HOXA1P49639 335 aaPredicted RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 TAF6P49848 677 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 MLLT10P55197 1068 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SORDQ00796 357 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 PDE1BQ01064 536 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SMARCB1Q12824 385 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 LRMPQ12912 555 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 TBX2Q13207 712 aaPredicted RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 SRSF6Q13247 344 aaKnown RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 ILKQ13418 452 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 PDIA5Q14554 519 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 MMEL1Q495T6 779 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SLC45A4Q5BKX6 768 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 CCNYL2Q5T2Q4 361 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 FAM72AQ5TYM5 149 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 IRAK1BP1Q5VVH5 260 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 JADE1Q6IE81 842 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 FAM72DQ6L9T8 149 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 LRRC8EQ6NSJ5 796 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 WDR73Q6P4I2 378 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 C9orf139Q6ZV77 190 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 VASH2Q86V25 355 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 HEATR4Q86WZ0 1026 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 FAM72BQ86X60 149 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 KMT5CQ86Y97 462 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 CHERPQ8IWX8 916 aaKnown RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 BBS7Q8IWZ6 715 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SLC35F3Q8IY50 421 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 ERMNQ8TAM6 284 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SPATA20Q8TB22 786 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SAP25Q8TEE9 199 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 RFFLQ8WZ73 363 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 ATXN7L3BQ96GX2 97 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SERAC1Q96JX3 654 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 QRFPRQ96P65 431 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 NAP1L4Q99733 375 aaKnown RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 HAUS8Q9BT25 410 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 LRRC1Q9BTT6 524 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 STRA6Q9BX79 667 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 LHX5Q9H2C1 402 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 ZHX3Q9H4I2 956 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 PPP1R3EQ9H7J1 279 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 PLEKHA5Q9HAU0 1116 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 SEPT10Q9P0V9 454 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 GCNT4Q9P109 453 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 ZFC3H1O60293 1989 aaKnown RBP3.65□□□□□ -1.83
CHD8-212ENST00000557329 C2CD3Q4AC94 2353 aa3.65□□□□□ -1.83
CHD8-212ENST00000557329 ANKRD17O75179 2603 aaKnown RBP3.64□□□□□ -1.83
CHD8-212ENST00000557329 KNL1Q8NG31 2342 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 ASPDHA6ND91 283 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 KPNA7A9QM74 516 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 VILLO15195 856 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 SPINT2O43291 252 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 HCRTO43612 131 aa3.64□□□□□ -1.83
CHD8-212ENST00000557329 BUD23O43709 281 aaKnown RBP3.64□□□□□ -1.83
CHD8-212ENST00000557329 HUS1O60921 280 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms